Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 837 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score = 88.6 bits (218), Expect = 6e-22
 Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 7/155 (4%)

Query: 210 LALTDPLTGLENRTAMFAELERHRRSGG-----FSLFLLDLNGFKQINDTYGHQMGDAVL 264
           L   DPLT L NR  + A LE+  R         +L  +D++ FK IND+YGH  GDA+L
Sbjct: 412 LVYHDPLTKLPNRMMLSANLEQELRHAAREETELALIFIDVDLFKHINDSYGHVTGDAIL 471

Query: 265 KQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQM-MMQRMIKQCFDHEFELSGDL 323
            +VA RL   +   +  + R+G DEF  +L  + S + + +M   +++ FD  F L  + 
Sbjct: 472 VEVARRLGQKLGE-EATLARLGSDEFIAVLPHVESDDSVSLMVSRLREAFDAPFLLDDEG 530

Query: 324 RAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
             +L  S+GV+ YP D  +   L+  AD  M+  K
Sbjct: 531 SVRLTASMGVAIYPGDGESGDTLLRNADTAMHRAK 565