Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score = 90.5 bits (223), Expect = 8e-23
 Identities = 61/175 (34%), Positives = 92/175 (52%), Gaps = 10/175 (5%)

Query: 193 VGLVSFILHKEATHHRV--LALTDPLTGLENRTAMFAEL-----ERHRRSGGFSLFLLDL 245
           VG+V  I  ++A HH++  +A  DPLTGL NR  +   L     E  +  G   L  +DL
Sbjct: 250 VGVVRDITQEKALHHKLEKMAHQDPLTGLPNRLQLELRLSEAIREASQSGGRLGLIFIDL 309

Query: 246 NGFKQINDTYGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQM-- 303
           N FK IND+ GHQ+GD VL   A RL  S+   +  V R+GGDEF ++L    +   +  
Sbjct: 310 NQFKAINDSLGHQVGDRVLMTAATRL-QSLKGSEDLVARIGGDEFVMLLPQWPADRPLEE 368

Query: 304 MMQRMIKQCFDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
            + R+ +  F+   E        +  S+G + YP  + ++  L+H+AD+ MY  K
Sbjct: 369 EVARLAEALFERFAEPVIQTGRGIAASIGFAIYPDHAGHMDALLHVADQAMYIAK 423