Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 97.8 bits (242), Expect = 8e-25
 Identities = 58/155 (37%), Positives = 92/155 (59%), Gaps = 10/155 (6%)

Query: 211 ALTDPLTGLENRTAMFAELER----HRRSGGFSLFLLDLNGFKQINDTYGHQMGDAVLKQ 266
           A  D LTGL NR A+F +++        + GFS  L+DL+ FKQ+NDTYGH  GD +L Q
Sbjct: 315 ANNDSLTGLANRNALFRQIQELINADSLTPGFSFMLMDLDNFKQVNDTYGHDKGDVLLVQ 374

Query: 267 VAYRLNNSIPSFDYRVF-RMGGDEFAIILSSINSTEQM--MMQRMIKQCFDHEFELSGDL 323
           +  ++   +      VF R+GGDEFAI+L  + +  ++  +  ++ KQ +   +ELS D 
Sbjct: 375 MVEQVKICLD--PQAVFARLGGDEFAILLPGVVTQRELSQLADKINKQVY-RRYELSHDK 431

Query: 324 RAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
               + S+G++ +P D+ +L QL++ AD+ MY  K
Sbjct: 432 GVYSSVSIGIARFPEDALDLEQLLNCADQAMYISK 466