Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 8/155 (5%)

Query: 210 LALTDPLTGLENRTAMFAELER-----HRRSGGFSLFLLDLNGFKQINDTYGHQMGDAVL 264
           +AL D LT L NR   +   ++     HR S  FSL  LDL+ FK +NDTYGH +GD +L
Sbjct: 286 IALYDQLTHLPNRELFYDRFQKALSRSHRESSYFSLLYLDLDKFKWVNDTYGHGVGDLLL 345

Query: 265 KQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQ-MMMQRMIKQCFDHEFELSGDL 323
           +  A RL   + + D  V R GGDEF I+L  ++S    +++   + +  +  FEL+ + 
Sbjct: 346 QITAQRLLGCVRASD-TVARFGGDEFVILLERVDSAHNTLLVAHKVLEALNQPFELT-EQ 403

Query: 324 RAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
           +  +  S+GV+ YP    +  QL+  AD  MY+ K
Sbjct: 404 QLYVFPSIGVALYPEHGKDEQQLLSCADAAMYKAK 438