Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 57/153 (37%), Positives = 81/153 (52%), Gaps = 8/153 (5%)

Query: 212 LTDPLTGLENRTAMFAELERHRRSGG-----FSLFLLDLNGFKQINDTYGHQMGDAVLKQ 266
           +TDPLTGL NR  M   L R             L  +DL+GFK +NDTYGH +GD +L+Q
Sbjct: 440 VTDPLTGLFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQ 499

Query: 267 VAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQM-MMQRMIKQCFDHEFELSGDLRA 325
           VA RL   +   D  + R+GGDEFA++L  +   E +  +   I       F  + D+  
Sbjct: 500 VAGRLRRRLRHTDIAI-RLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCT-DIPC 557

Query: 326 KLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
            ++ S+G S YP  + +   L+ LAD+ MY  K
Sbjct: 558 SVSASIGASLYPQHADDAPSLLRLADEAMYRAK 590