Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella sp. ANA-3

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 8/166 (4%)

Query: 203 EATHHRVLALTDPLTGLENRTAMFAELER-----HRRSGGFSLFLLDLNGFKQINDTYGH 257
           E  H R +A  D LT L NR     +LE+      R  G F++  LDL+ FK +ND +GH
Sbjct: 493 EEEHLRHIAHHDALTNLPNRVLFHTKLEQAIVHAQRSDGIFAILFLDLDNFKPVNDEFGH 552

Query: 258 QMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQM-MMQRMIKQCFDHE 316
            +GD +L++VA RL +SI   D  + R+GGDEF I+L  + + E + ++ R I Q     
Sbjct: 553 DVGDKLLQEVAKRLTSSIRQID-TITRLGGDEFVILLEHLPNEESVPILIRKITQALTAP 611

Query: 317 FELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMKFLQK 362
           + +    +  +  S+G + YP    +   LI+ AD+ MY +K   K
Sbjct: 612 YIIHKH-KLHIGVSIGSAIYPCHGIDAKSLINYADQAMYVVKKANK 656