Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 878 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score = 92.0 bits (227), Expect = 5e-23
 Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 7/155 (4%)

Query: 210 LALTDPLTGLENRTAMFAELE---RH--RRSGGFSLFLLDLNGFKQINDTYGHQMGDAVL 264
           LA  DPLT L NR  +  +L+   RH  R +   +   +D++ FK IND++GH +GD +L
Sbjct: 451 LAYFDPLTHLPNRMKLMMQLKQELRHAKRLNAQLATVFIDVDLFKHINDSFGHSIGDEML 510

Query: 265 KQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQMMMQ-RMIKQCFDHEFELSGDL 323
            ++A RL + +   D  + R+GGDEF  ++S I S E        ++Q F+  F +S   
Sbjct: 511 VELAKRLRSQLQEQDV-LSRIGGDEFVALISGIQSHEDAAAAINQLRQVFEQPFVVSTGD 569

Query: 324 RAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
             +L  S+GVS YP D +N   L+  AD  MY  K
Sbjct: 570 HLRLTASMGVSIYPDDGSNADTLLRNADAAMYRAK 604