Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Shewanella sp. ANA-3

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 8/155 (5%)

Query: 210 LALTDPLTGLENRTAMFAELER-----HRRSGGFSLFLLDLNGFKQINDTYGHQMGDAVL 264
           +AL D LT L NR   +   ++     +R S  FSL  LDL+ FK +NDTYGH +GD +L
Sbjct: 303 IALYDQLTHLPNRELFYDRFQKALSRANRESSYFSLLYLDLDKFKWVNDTYGHGVGDLLL 362

Query: 265 KQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTEQ-MMMQRMIKQCFDHEFELSGDL 323
           +  A R+   + + D  V R GGDEF I+L  ++S +  +++ + I +  +H FEL    
Sbjct: 363 QITAQRILGCVRNSD-TVARFGGDEFVILLERVDSAQNTLLVAQKILEVLNHPFELVNQ- 420

Query: 324 RAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
           +  +  S+G++ YP    +  QL+  AD  MY+ K
Sbjct: 421 QIHILPSIGIALYPEHGKDEKQLLSCADSAMYKAK 455