Pairwise Alignments

Query, 306 a.a., phosphate ABC transporter permease subunit PstC from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  101 bits (252), Expect = 5e-26
 Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 8/164 (4%)

Query: 136 PSVVYGFFG---LVIIVPLIQDVFDVPAGNTILAGIIVLGVMILPTVITVSETSIRAVPR 192
           PS+   FFG    + I   +   FD    N ++ GI  +G  ++PT+ +++E ++ +VPR
Sbjct: 575 PSIEVAFFGGDTRLFITNELGITFD--QRNALVVGI-AMGFAVIPTIFSIAEDAVFSVPR 631

Query: 193 AYKEGSLALGASSIYTIFKLLVPAARSGIMTGVILGIGRALGETMAIIMVMGNAPAMPEG 252
               GSLALGA++  T+ ++++  A  GI + V++G+GRA+GETM ++M  GN   M   
Sbjct: 632 HLSNGSLALGATNWQTLTRVVLLTASPGIFSAVMMGLGRAVGETMIVLMATGNTAIMEWS 691

Query: 253 LLDSARTLTANIAIEM--SYASGIHANALYATGVVLLVFIMMLN 294
           + +  RTL ANIA+EM  S     H   L+    VL +F  + N
Sbjct: 692 VFEGMRTLAANIAVEMPESAIGSSHYRVLFLAAFVLFIFTFLFN 735



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 10/99 (10%)

Query: 98  AVIVGVPVGVLTAIFIAEVAPKRVADVIRPAVELLAGIPSVVYGFFGLVIIVPLIQDVFD 157
           A++   P+ +  A++ A     +V  V++P +E++  +P+V+ GF   + + PLI+D   
Sbjct: 460 AMLFATPLAIAGAVYTAYFMSPKVRAVVKPTIEIMEALPTVILGFLAGLWLAPLIED--- 516

Query: 158 VPAGNTILAGIIVLGVMILPTVITVSETSIRAVPRAYKE 196
                  L GII+L +++LP  I ++      +P  +K+
Sbjct: 517 ------HLPGIIML-LVLLPISILLTALGWYKLPGRWKQ 548