Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  215 bits (547), Expect = 5e-60
 Identities = 144/472 (30%), Positives = 251/472 (53%), Gaps = 20/472 (4%)

Query: 91  KQTENLALLR----SLADNPELKNEVAGLTQAMQRYVDYSIQTMIPLLNIEHSDQEKDER 146
           K  E++AL+R        NP    E A   Q        SI+T+       ++D  K   
Sbjct: 174 KAKEDVALVRYEVRGYTGNPNSATEQAATRQLENALK--SIETLNGAFGPSYADTIKQLE 231

Query: 147 -----FTAQYEQATAEYRKVGNEMIKAIDV------LSNRLNQVAMTTIDESEHEHDSVM 195
                +    +  TA  + +G  +   ID+      L++ +    + ++ + E     ++
Sbjct: 232 TALIAYRRSVQNFTASNQAIGKAVQDTIDLGETITRLTDEMYASQLVSLGD-ESAQSRIL 290

Query: 196 SQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVREIAKGNLLVKAQEEGNNEITLLA 255
             S  AL   +L+  L++ ++   I  P++     V  IA G+L         +E+ +L 
Sbjct: 291 QLSCTALA--MLLGILAAMIITRQITRPLQDTLAVVDRIAAGDLTQGTVVTRGDELGVLQ 348

Query: 256 RDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQ 315
           + +    T LR  +  +    T +ASA+ EL+ V  Q S   + +K E +QVA+A+ ++ 
Sbjct: 349 QGIQRMGTTLRDLIGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKTETDQVATAMQEMS 408

Query: 316 STAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSE 375
           +T   V  +A  A   A +A+  A    ++  ++     ++A ++  +   +++L+++S 
Sbjct: 409 ATVHEVARNAEQACTVASEADAQARIGDQVVAQAIVQIERLASEVGRSVDAMDELEQESA 468

Query: 376 RIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQA 435
           RIG + +VIR+++EQTNLLALNAAIEAARAG++GRGFAVVADEVR LA RTQ ST+EI++
Sbjct: 469 RIGKIMDVIRAVAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRGLAQRTQHSTEEIES 528

Query: 436 IIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEE 495
           ++  LQN +   +S M +S  L + +  LA K   SL  I  ++S +  +N Q+A A+ +
Sbjct: 529 LVAGLQNGTRQVSSIMRNSRELTDSSVELAGKAGISLGNITQAVSGIQAMNQQIAAAAVQ 588

Query: 496 QSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
           QS V ++I+R++ N+ ++  Q  +   ++AA+S EL+ L  Q  Q + +F+V
Sbjct: 589 QSSVAEEISRSILNVRDVSEQTASASEETAASSIELARLGNQLQQLVSHFKV 640