Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  231 bits (590), Expect = 4e-65
 Identities = 135/370 (36%), Positives = 220/370 (59%), Gaps = 1/370 (0%)

Query: 178 QVAMTTIDESEHEHDSVMSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVREIAKG 237
           QV++ +    EH  +S M  S F ++  L    L+  LL   IV P+         +A+G
Sbjct: 173 QVSIESQKSQEHYANSRMIVSLFVVLAALATVVLAM-LLTRSIVKPLGAALNAAESVARG 231

Query: 238 NLLVKAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNS 297
           +L    +  GN+E++ L + +      LR+T++ +   +  +A+A+ EL  V   ++ + 
Sbjct: 232 DLTRPIETHGNDEVSRLLKALATMQQNLRETLQGISGSAAQLATAADELNAVTLDSTHSL 291

Query: 298 DQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMA 357
            Q+  E+EQ A+AV ++ +  + V  +A S   A +Q+++ AS   +   ++  A   +A
Sbjct: 292 QQQNNEIEQAATAVTEMTTAVEEVARNAVSTSDATRQSSESASLGQQRVSDTVDAIGALA 351

Query: 358 DQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVAD 417
             ++    +V  L  QS+ IG V +VIR+I+EQTNLLALNAAIEAARAGESGRGFAVVAD
Sbjct: 352 SDVQVTGGLVQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVAD 411

Query: 418 EVRMLAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINH 477
           EVR LA RTQ STQEI+ +++ +++ +  A  SM +S S      ++A +   +L  I  
Sbjct: 412 EVRALAYRTQQSTQEIEQMVQGMRSGATQALDSMQASSSRAASTLAMAERAGDALQTITA 471

Query: 478 SISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQ 537
           S++ + + N  +A+A+EEQ+QV ++++RNL NI +L  ++ +G  Q++A+SHELS LA  
Sbjct: 472 SVNEIHERNLVIASAAEEQAQVAREVDRNLVNIRDLSVRSASGADQTSASSHELSQLANS 531

Query: 538 QHQQLQYFRV 547
               +Q F+V
Sbjct: 532 LRTMVQRFQV 541