Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  228 bits (582), Expect = 5e-64
 Identities = 132/351 (37%), Positives = 216/351 (61%), Gaps = 4/351 (1%)

Query: 201 ALIGILL--VAALSSWLLAGIIVTPIRQLQQTVREIAKG--NLLVKAQEEGNNEITLLAR 256
           A++G+++  +  L  WL+   I  P++Q+   + +IA+G  +L  +   +  +E+  +AR
Sbjct: 362 AMVGLVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIAR 421

Query: 257 DVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQS 316
             N  +++L+  +  +V     V+ +S   A +  + +    ++  E++QVA+AV+++ +
Sbjct: 422 GFNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTA 481

Query: 317 TAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSER 376
           TAQ V  +A  A  AA  A+Q ASQ +++  ++  +   +A ++ +A  VV  L + SE 
Sbjct: 482 TAQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSEN 541

Query: 377 IGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAI 436
           I  +   IR I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TQ +T+EIQA+
Sbjct: 542 INAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQAM 601

Query: 437 IEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQ 496
           I++LQ  +      M  S    +++   AAK + +L  I  ++S +  +N Q+A+A+EEQ
Sbjct: 602 IQQLQQGTRDVVRVMEDSQHRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQ 661

Query: 497 SQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
           S V  DINRN+ NI ++ ++  +G  +S+AAS  L+ LAEQQ + +  FRV
Sbjct: 662 SAVADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712