Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  206 bits (525), Expect = 1e-57
 Identities = 152/474 (32%), Positives = 250/474 (52%), Gaps = 36/474 (7%)

Query: 89  KEKQTENLALLRSLADNPELKNEVAGLTQAMQRYVDYSIQTMIPLLNIEHSDQEKDERFT 148
           K++ ++ L  L  L D PE K     L +  + YV    Q    +         +   F 
Sbjct: 87  KKRISQALEALEPLFDLPEGKTAYMALKRDREAYVAAFTQVQALI---------RQGAFD 137

Query: 149 AQYEQATAEYRKVGNEMIKAIDVLSNRLNQVAMTTIDESEHEHDSVMSQSTFALIGILLV 208
           A   Q   +      ++ K++D+L  +  Q+      + E    ++ S +   ++G LLV
Sbjct: 138 AAMAQLKQQVIPAEQQVYKSLDMLMAQQGQI----FADRERSAQALYSDARLNMLG-LLV 192

Query: 209 AALSSWLLAGIIVTP--IRQL-------QQTVREIAKGNLL----VKAQEEGNNEITL-- 253
             L+S + A +IVT    R L        + + +IA+G+L     VKA  +G+  + +  
Sbjct: 193 FCLASVIAAAVIVTRSVTRPLGGEPDVAARALSQIAQGDLTTQVPVKANADGSVMMNMHQ 252

Query: 254 LARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQ 313
           + + +NA V  +  +V+        VAS+S EL+ V +Q   +   +  E+EQ A+A+NQ
Sbjct: 253 MQQSLNAMVKHIAASVDQ-------VASSSEELSAVSSQTRDSLQLQGLEIEQAAAAINQ 305

Query: 314 LQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQ 373
           + +    V  +A S   A++ + Q A +     +E+  +   +AD + + +Q + QL  +
Sbjct: 306 MTAAVDEVARNAVSTSEASRVSEQTAQRGREHVQETVASIGTLADGMTDTSQRIQQLAGR 365

Query: 374 SERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEI 433
            + I  V EVIRSI+EQTNLLALNAAIEAARAG++GRGFAVVADEVR LA RTQ STQEI
Sbjct: 366 VQDISTVLEVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQVSTQEI 425

Query: 434 QAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATAS 493
           + +I  ++  +  A ++M SS  L++    +A +   +L  I  SIS + + N  +A+A+
Sbjct: 426 EQMIGNIRLDTGHAVTAMQSSGYLVQATLEVAQRSGEALEAITRSISQINERNLMIASAT 485

Query: 494 EEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
           EEQ+ V ++++RNL  I  +  Q + G   +  A  EL+ +A   HQ +  F++
Sbjct: 486 EEQALVAREVDRNLVRIRNVSGQVLLGAQHTHTAGLELAQMAGTLHQTVARFKI 539