Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  219 bits (558), Expect = 2e-61
 Identities = 122/343 (35%), Positives = 205/343 (59%)

Query: 205 ILLVAALSSWLLAGIIVTPIRQLQQTVREIAKGNLLVKAQEEGNNEITLLARDVNATVTQ 264
           ++L+  L++ ++   I  P+R     V  IA G+L         +E+ +L + +    T 
Sbjct: 298 VMLLGILAAVIITRQITRPLRDTLAIVERIASGDLTHTEAVTRRDELGVLQQGIQRMGTT 357

Query: 265 LRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSVTDH 324
           LR+ +  +    T +ASA+ EL+ V  Q S   + +K E +QVA+A++++ +T   V  +
Sbjct: 358 LRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVHEVARN 417

Query: 325 AHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSERIGNVTEVI 384
           A  A  AA  A+Q A    ++  E+ +   ++A ++  ++  +N L++ S++IG V +VI
Sbjct: 418 AEQASVAASDADQQARDGDKVVGEAIQQIERLAAEVVRSSDAMNVLEQDSDKIGKVMDVI 477

Query: 385 RSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAIIEELQNQS 444
           ++++EQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ ST+EI+ ++  LQN +
Sbjct: 478 KAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTEEIEGLVAALQNGT 537

Query: 445 NTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQSQVTKDIN 504
              +  M  S +L + +  L  +   SL  I  ++S++  +N Q+A A+E+QS V  +I+
Sbjct: 538 RQVSGIMLGSRTLTDSSVELTRRAGTSLESITRTVSSIQAMNQQIAAAAEQQSSVADEIS 597

Query: 505 RNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
           R++ N+ ++  Q      ++AA+S EL+ L  Q    + +FRV
Sbjct: 598 RSIVNVRDVSEQTAEASEETAASSVELARLGGQLQMMVSHFRV 640