Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  214 bits (546), Expect = 6e-60
 Identities = 130/400 (32%), Positives = 231/400 (57%), Gaps = 7/400 (1%)

Query: 148 TAQYEQATAEYRKVGNEMIKAIDVLSNRLNQVAMTTIDESEHEHDSVMSQSTFALIGILL 207
           T    QA  E    G +++K    +S  + ++ +   D+   +  +  +Q T  L+ I+L
Sbjct: 248 TGTIVQARKEMTTQGQDIVK----ISEDMYKLQLDRRDQESAQART--TQITCTLLAIIL 301

Query: 208 VAALSSWLLAGIIVTPIRQLQQTVREIAKGNLLVKAQEEGNNEITLLARDVNATVTQLRQ 267
              +++ ++   I  P+R+    V  IA G+L        ++E+ +L + +    T LR+
Sbjct: 302 -GIIAAVIITRQITRPLRETLAVVDRIASGDLTQTLAVTRSDELGVLQQGIQRMGTTLRE 360

Query: 268 TVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHS 327
            +  +      +ASA+ EL+ V  Q S   + +K E +QVA+A++++ +T   V  +A  
Sbjct: 361 LIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAEVARNAEQ 420

Query: 328 ADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSERIGNVTEVIRSI 387
           A  AA  A++ A    ++  E+     ++A+++  +   + +L+++S++IG V +VI+++
Sbjct: 421 ASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKVMDVIKAV 480

Query: 388 SEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAIIEELQNQSNTA 447
           +EQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ ST EI+ ++  LQ+ +   
Sbjct: 481 AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAALQSGTRQV 540

Query: 448 NSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQSQVTKDINRNL 507
           +S M +S  L   + +L+ +   SL  I  ++S++  +N Q+A A+EEQS V ++I+R++
Sbjct: 541 SSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVAEEISRSI 600

Query: 508 SNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
            N+ ++  Q  +   ++AA+S EL+ L  Q    +  FR+
Sbjct: 601 VNVRDVSEQTASASEETAASSVELARLGGQLQTMVSRFRI 640