Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  233 bits (594), Expect = 1e-65
 Identities = 159/466 (34%), Positives = 254/466 (54%), Gaps = 26/466 (5%)

Query: 95  NLALLRSLADNPELKNEVAGLTQAMQRYVDYSIQTMIPLLNIEHSDQEKDERFTAQYEQA 154
           ++  L  + DN  L +++A   +A        +  ++ LL     D+   E F    +  
Sbjct: 120 SIKTLHDIIDNQILASDLADDERA-------EVNRLVSLL-----DKVTQEGFNPAIQAL 167

Query: 155 T-AEYRKVGNEMIKAIDVLSNRLNQVAMTTIDE--SEHEHDSVMSQSTFALIGILLVAAL 211
           +  EY++    +++ I+ L   +   A   +D   +E +     SQ T +L  I LVA  
Sbjct: 168 SQGEYKRSNQLLLEKINPLFKDITDQAQAFLDMQIAEAKTSYQASQETVSLY-IWLVAIF 226

Query: 212 SSWLLAGIIVTPIR----------QLQQTVREIAKGNLLVKAQEEGNNEITLLARDVNAT 261
           S   +  I V+ +           QL++T  +IA G+L  + +  G++E   +A  VN  
Sbjct: 227 SGVAMLAISVSSVFIIRRVSLSVVQLEETAVDIAAGDLTKRIRLGGHDEFAHIAEHVNRI 286

Query: 262 VTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSV 321
            +  +Q V +    ++ +ASA+ E A V TQ   N   ++Q+ + +A+A+++  +T + V
Sbjct: 287 ASDFQQAVTNTHASTSRLASAAEENAVVSTQTQRNVLDQQQQTQLIATAIHEFTATVREV 346

Query: 322 TDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSERIGNVT 381
              A SA  A+Q AN  A  +  + +ES      +A +L  A++ +  L + S  IG V 
Sbjct: 347 AQSAASAATASQDANGAAHGAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNEIGTVV 406

Query: 382 EVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAIIEELQ 441
           +VI++ISEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST+EIQ +I+ LQ
Sbjct: 407 DVIQAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQRLQ 466

Query: 442 NQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQSQVTK 501
             +  +   M S    ++ +   +  V  +L +I +SI  +  +NAQ+ATASEEQS VT+
Sbjct: 467 QGARDSMQMMQSGTEQVKLSVDKSLMVRDALQQILNSIEEINALNAQIATASEEQSSVTE 526

Query: 502 DINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
           +IN N++NI E+  Q   G  QS+ A+ +L+ LAE     + +++V
Sbjct: 527 EININITNISEISDQTAEGARQSSDATEDLARLAESMEADIAHYKV 572