Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  206 bits (523), Expect = 2e-57
 Identities = 134/403 (33%), Positives = 216/403 (53%), Gaps = 6/403 (1%)

Query: 151 YEQATAEYRKVGNEMIKAIDVLSNRLNQVAMTTIDESEHEHDSVMSQSTFALIGILLVAA 210
           +E A   +     +  KA+  + N   + A   + E + +     +  T   + I  + A
Sbjct: 140 FELARQLHENKSKKEFKALRSIYNAAGEAADNRVKELDLQASEQATTQTQISVTIATLVA 199

Query: 211 LSSWLLA----GIIVTPIRQLQQTVREIAKG--NLLVKAQEEGNNEITLLARDVNATVTQ 264
           + + ++A     IIV  IR +   + +I  G  NL  +      +EI  LA   N  V Q
Sbjct: 200 IVALVIAYFGPKIIVNAIRDITDRINDIVDGDGNLTQRIPITRQDEIGELANAFNLFVAQ 259

Query: 265 LRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSVTDH 324
           L+Q V +++  + DV+     LAT  T     S +++Q V+ + +AVN++ +  + V  +
Sbjct: 260 LQQMVIAIISQTKDVSQTVENLATKSTTTIGISYEQEQFVDTIVTAVNEMSAAVREVASN 319

Query: 325 AHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSERIGNVTEVI 384
           A        + N    +   +  +S     ++++ +++A  V+ +L   S  I +V +VI
Sbjct: 320 ALHTATEITKVNDQTIEGKNILTQSVNHIQQLSESVKQAVAVIEKLSVNSANIASVLDVI 379

Query: 385 RSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAIIEELQNQS 444
           RSI+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RT+TSTQ+IQ +IEELQ   
Sbjct: 380 RSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTETSTQDIQRMIEELQRGV 439

Query: 445 NTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQSQVTKDIN 504
           N A  S+ S  SL     +LA++   +L EI +S S + +++ Q ATA+EEQ+ VT++IN
Sbjct: 440 NDAVKSIESGASLTNSTVTLASQTQDALDEILNSTSKVSEMSTQTATATEEQTHVTEEIN 499

Query: 505 RNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
           RNL+ + +      T I ++         +     +++  F+V
Sbjct: 500 RNLTELSDKTRYCNTVIQETQQIVVNTQTICSNLQKEVSRFKV 542