Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 743 a.a., iron transport protein from Sinorhizobium meliloti 1021

 Score =  158 bits (399), Expect = 1e-42
 Identities = 164/700 (23%), Positives = 286/700 (40%), Gaps = 78/700 (11%)

Query: 52  LEGETLEKQGKTELYDALNQEPGVSVTGGAGRPQ---NITIRGMTGNRIAIVRDGI---- 104
           ++ +TLE++  T+L D      G SV  G    +    I +RG++G RI    DG+    
Sbjct: 72  IDAKTLEEKQVTDLDDL-----GRSVDAGINASRADFGINLRGLSGPRIVTTIDGVPIPY 126

Query: 105 --QSADGYGAADINDKYGRNTFSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAPEDY 162
              SA     A IN   G + F  +++  + +V+GA S+  GSG +GG V++ +  PED 
Sbjct: 127 ISNSARQGAFASINANGGGDMFDFNSLSVVDIVRGADSSRGGSGMLGGAVVLRTLEPEDV 186

Query: 163 LYH-RDYYVDAALTYSGISNRYQGNHALAMRHGDGEALLTIDYWQGEETRN--------- 212
           +   +D+       Y    +   G+ A A R G    L    Y +G E  N         
Sbjct: 187 ISDGKDWGAIFRSIYDSEDDSIAGSVAGAHRFGQTSVLFQGSYRKGNERDNEGTVGGYGS 246

Query: 213 FNQDLYNREVDGYNLGFSHHYWLNDALRLKTHLEYFDDYAKRREGTSSIQKDD--KWDLV 270
              +    + D  NL F   + L    R+    E F     RR+  + ++ +   ++ + 
Sbjct: 247 ARTEPNPTDFDQNNLLFKFRHELEGGHRIGLTAESF-----RRDADNDLRAEQGRRYKIG 301

Query: 271 SFYEYQRSQTRLASVGADYTANLS--WMDTLEGKFYWRSTENITQTN-RLMANDRSGAGI 327
            +  ++    +  S+  D+ A  S  +        YW+  E  + +N R +A+   G   
Sbjct: 302 DYTGFEDRDRKRVSLDYDFEAASSDDFFSFARASLYWQDLERSSGSNGRTIADVPYG--- 358

Query: 328 LSYRRELRDEGFNDEALGATLNAQKEWQQGEWLHQFAYGMSVDGHDY-QRPKSIRRMESS 386
                  RD   ++E++G    A K+++ G + H   +G+ V   ++ Q   ++    ++
Sbjct: 359 -------RDNSISNESVGFNGRAGKDFETGGFDHSLTFGLDVARSEWSQYTSAVCPTPAT 411

Query: 387 GDDLQADEPFAPAREYRFGVYGQDNLLLGD--WTLAAGLRFDAQKLSPK-------NTDR 437
              L         R    G   +D + +GD  + L  GLRFD  +  P+       NT  
Sbjct: 412 CPALNNQSEVPDVRSMTVGAILEDRISVGDSAFALTPGLRFDWFQYDPQLNAGFESNTGS 471

Query: 438 IHGYKVVTMGSSEWSPSASISYQWHPEWNTYLSYNHGFRAPSYDKAYGASDHSFVPLTPF 497
                +        SP    +Y   P+   +  ++  FRAP+ D+ Y      + P   +
Sbjct: 472 GIFGDLKARDGVRLSPKLLATYDVTPDVELFAQWSMAFRAPTVDELY---SRFYNPFGNY 528

Query: 498 IIKPNNKLRAETSDSFELGSKYDNGQTQFYVAVFYSIFDNFIDVKQVGYDNATGSVIQQY 557
               N  L+ ET   FE+G+ +D G+    VA F++I+DNFI+      ++ TG    +Y
Sbjct: 529 AQLGNPDLKPETGKGFEIGANFDTGELSGRVAAFHNIYDNFIETGD-SINSDTGIREFKY 587

Query: 558 QNIAGVKTYGAEMSVMHRLDDRWSVENKLGYVDGK-DGENQYVRTLTPLEGSVQLNYQRE 616
            N+   +  G E+S +   D+ +++   L Y  GK + E   +RT+ P +  +   Y +E
Sbjct: 588 ANVNKARISGIELSALKTFDNGFNLHASLAYSYGKNEDEGTRLRTVAPFKAIIGGGYSQE 647

Query: 617 RWDAYSRLNWASAMSRVPTCTTEQGKETECATTTGWVSWDIGLNYQWNAQ----LSASFN 672
            +        ++AM       T           TGW          W  +    L     
Sbjct: 648 TFGVDVSTTVSAAMPDDNDSETFDAPGYGLVDMTGW----------WTPESFKGLRVEAG 697

Query: 673 VVNLLDREY-----TRYQDVAGVTPSDTLYSTEPGRYFTV 707
           V N+ D++Y      R  D+A  +     + +EPGR F V
Sbjct: 698 VYNIFDKKYFNALGVRGVDLASSSAQPRDFYSEPGRTFKV 737