Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 682 a.a., TonB-dependent receptor (NCBI) from Rhodospirillum rubrum S1H

 Score = 75.9 bits (185), Expect = 6e-18
 Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 9/154 (5%)

Query: 8   AAVLS--VLAAGFAHAETEPSHYEEVVVTANRIEQPLSEVAGSVAVLEGETLEKQGKTEL 65
           AAV++  V A+G A    EP   E ++V+A+R      ++  SV+VL GE L ++G   +
Sbjct: 41  AAVMAGVVGASGAAAWADEPETTEGLIVSASRTPVAAKDLGRSVSVLTGEDLRERGVRYV 100

Query: 66  YDALNQEPGVSVT--GGAGRPQNITIRGMTGNRIAIVRDGIQSADGYGAADINDKYGRNT 123
            DAL Q PGV+V+  GG G    + +RG   N + ++ DG+       ++  + +Y    
Sbjct: 101 SDALRQLPGVAVSRAGGPGGVTQVRLRGAEANHVLVLIDGVAV-----SSPASGEYDFAG 155

Query: 124 FSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESK 157
              S++++I+V++G  S L+GS A  GV+ I ++
Sbjct: 156 LVASDIERIEVLRGPQSALWGSNATAGVISIVTR 189