Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 770 a.a., TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein from Dechlorosoma suillum PS

 Score =  160 bits (404), Expect = 3e-43
 Identities = 189/750 (25%), Positives = 318/750 (42%), Gaps = 65/750 (8%)

Query: 3   LSPVSAAVLSVLAAGFAHAETEPSHYEEVVVTANRIEQPLSEVAGSVAVLEGETLEKQGK 62
           ++ ++ AVL+ L A  A A+ + S  +EVVVTA R E     +  ++  ++ +TL+++  
Sbjct: 27  VAAIAPAVLA-LGASQAQAQAQTSELKEVVVTATRQEADPDLIPATITSIDRKTLDRRMP 85

Query: 63  TELYDALNQEPGVSVTGGAGRPQN--ITIRGMTGNRIAIVRDGIQSADGY---GAADIND 117
            +    +  E  V ++    R  +  + IRG+ G R+    DG++  D Y   G ++I  
Sbjct: 86  HDEAALMENEADVVISRDLRRYGSAAVNIRGIEGIRVLQQVDGVRLPDYYYGGGPSNITA 145

Query: 118 KYGRNTFSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAPEDYLYHRDYYVDAALTYS 177
                   +  +K+ ++++G +S+LYGS A+GGVV   +  P+D L  R   +    T+ 
Sbjct: 146 SMPDGP-EMDFLKRAEILRGPASSLYGSDALGGVVGYLTLDPQDLLQGRSSAMRYKGTWR 204

Query: 178 GISNRYQGNHALAMRHGDGEALLTIDYWQGEETRNFNQ---DLYNREVDGYNLGFSHHYW 234
              + +Q     A  +   E LL      G+E  N        YNRE        S    
Sbjct: 205 QADHSFQNTVYAAGGNDLVEGLLAYSQRNGKELDNKGNVGGTGYNREQPNPQDTKSDSVL 264

Query: 235 LNDALRLKTHLEYFDDYAKRREGT--SSIQKDDKWDLVSFYEYQRSQTRLASVGADYTAN 292
               L+  T       Y  R +     S++       V+   Y    T+    G D+   
Sbjct: 265 AKIILKPATGHRIGLTYENREQDNHVDSLRLSSGVPKVT-QTYGDENTKRERYGIDWEWK 323

Query: 293 LS--WMDTLEGKFYWRSTENITQTNRLMANDR------SGAGILSYRRELRDEGF--NDE 342
            +  W D L  KFY +  ++ T T +  +N        SGAG       L D  F  N +
Sbjct: 324 PTDRWFDRLALKFYHQEADSKTYTMQRRSNTSASCSASSGAG----NNCLVDMNFMFNQK 379

Query: 343 ALGATLNAQKEWQQGEWLHQFAYGMS--VDGHDYQRPKSIRRMES--SGDDLQAD----E 394
             G  L     +Q G   H  AYG        +  R  ++  + +  +G  L  D    +
Sbjct: 380 TDGLNLQLDSYFQTGAVSHSLAYGADWRQTRTEELRDYTVHNLTTGTTGKTLAGDTYPLK 439

Query: 395 PFAPAREYRFGVYGQDNLLL--GDWTLAAGLRFDAQKLSPKNTDRIHGY--KVVTMGS-- 448
            FAP      G++ QD L    G + L  G+R+D  KL P    ++ G     VT+ S  
Sbjct: 440 DFAPGESTNLGLFVQDELSFMDGKFLLTPGVRYDEVKLRPDGMSKVAGSGGSAVTLSSAS 499

Query: 449 ---SEWSPSASISYQWHPEWNTYLSYNHGFRAPSYDKAYGASDHSFVPLTPFIIKPNNKL 505
              S  SP     +Q  P    Y     GFRAP+Y++  G   ++      ++  PN  L
Sbjct: 500 QNHSAVSPKIGALWQASPAVALYGQLVRGFRAPNYEEVNGLFYNA---AQNYVTLPNGNL 556

Query: 506 RAETSDSFELGSKYDNGQTQFYVAVFYSIFDNFIDVKQVGYDNAT-----GSVIQQYQ-- 558
           +AE S   ELG++         VAV+ + +D+FI+  +V  D A      G     YQ  
Sbjct: 557 KAEKSTGLELGTRLKALGGDIKVAVYDNRYDDFIEQVRVCNDTAAPFTCPGGTRSAYQKL 616

Query: 559 NIAGVKTYGAEMSVMHRLDDRWSVENKLGYVDGKDGE-NQYVRTLTPLEGSVQLNYQRER 617
           N++ V+  GAE+         ++ +  +    G D + N+ + ++ PL   +   + + +
Sbjct: 617 NLSKVRIQGAEVRGSWLFAGGYAFQGSIATARGDDEQNNRPLNSIEPLRAVLSFLWDKGQ 676

Query: 618 WDAYSRLNWASAMSRVPTCTTEQGKETECATTTGWVSWDIGLNYQWNAQLSASFNVVNLL 677
           W   +RL  A+A  R+    T+  K        G+   D+   +Q + +   +  V N+ 
Sbjct: 677 WGGETRLRLAAAKERINDADTDYYK------PAGYGVMDVSTWWQVDKRFRLTAAVNNVF 730

Query: 678 DREYTRYQDV--AGVTPSD--TLYSTEPGR 703
           D++YT + DV  AG+  +D    + T+PGR
Sbjct: 731 DKQYTLWSDVRHAGLLSTDPGPSFFTQPGR 760