Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 663 a.a., enterobactin receptor protein (RefSeq) from Shewanella oneidensis MR-1

 Score = 90.1 bits (222), Expect = 3e-22
 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 12/188 (6%)

Query: 6   VSAAVLSVLAAGFAHAETEPSH---YEEVVVTANRIEQPLSEVAGSVAVLEGETLEKQGK 62
           VSAA+L  L A +A AE  P      E +VVTA+  EQ + +   S++V+  E L+ +  
Sbjct: 13  VSAALL--LPATYAFAEAAPDKDKIMERIVVTASGFEQQVRDAPASISVITREDLDTRFY 70

Query: 63  TELYDALNQEPGVSVTGGAGRPQNITIRGMTGNRIAIVRDGIQ--SADGYGAADINDKYG 120
            +L DA+   PGV VTGGA R ++I++RGM      I+ DG +  S +    +D     G
Sbjct: 71  RDLTDAMLAVPGVVVTGGADR-RDISLRGMGSQYTLILVDGKRQSSRETRTNSDGPGVEG 129

Query: 121 RNTFSLSNVKQIQVVKGASSTLYGSGAIGGVV-IIESKAPEDYLYHRDYYVDAALTYSGI 179
             T  L+ + +I++V+G  S+LYGS AIGGV+ II  K P +  +  +  +D  L    +
Sbjct: 130 AWTPPLAAIDRIEIVRGPMSSLYGSDAIGGVINIITRKVPNE--WQGELRLDTTLQEKSV 187

Query: 180 S-NRYQGN 186
           S N YQGN
Sbjct: 188 SGNVYQGN 195



 Score = 45.8 bits (107), Expect = 7e-09
 Identities = 69/304 (22%), Positives = 117/304 (38%), Gaps = 57/304 (18%)

Query: 403 RFGVYGQDNL-LLGDWTLAAGLRFD-----AQKLSPKNTDRIHGYKVVTMGSSEWSPSAS 456
           ++ V+ +D   ++ D+ L  GLR D      + LSP    RI+G          W  + S
Sbjct: 374 QWSVFSEDEWRIVDDFALTLGLRLDDDENFGEHLSP----RIYGV---------WGLTGS 420

Query: 457 ISYQWHPEWNTYLSYNHGFRAPSYDKAYGASDHSFVPLTPFIIKPNNK-----LRAETSD 511
            + +           + GFRAPS  +         VP    + +  N      L+ ETS 
Sbjct: 421 TTLKG--------GISTGFRAPSLRQT--------VPDWGQVSRGGNMYGNPDLQPETSV 464

Query: 512 SFELGSKYD-NGQTQFYVAVFYSIFDNFID------VKQVGYDNATGSVIQQYQNIAGVK 564
           ++ELG   D          VFY+ F + I        +     N  GS    Y NI    
Sbjct: 465 NYELGIYTDLTDSITTSAGVFYNEFKDKITRVACPATQCTDGPNQFGSDPTTYVNIDEAV 524

Query: 565 TYGAEMSVMHRLDDRWSVENKLGYVDGKDGENQY----VRTLTPLEGSVQLNYQR-ERWD 619
           T G E+S+ +++    ++     Y D +     Y    +  L      + +NY+  +  +
Sbjct: 525 TQGVELSIDYKILSNLALTGNYTYTDSEQKTGAYKGSPLNQLPKHLIQLSVNYEPIDNLN 584

Query: 620 AYSRLNWASAMSRVPTCTTEQGKETECATTTGWVSWDIGLNYQWNAQLSASFNVVNLLDR 679
            + R+N+    S+  T     G  +       +   D+G NY+ N  +  S  + N  D+
Sbjct: 585 TWLRVNYRGEESQPTT-----GPSSRSLIAPSYTLLDLGANYRVNDSIKFSAGIYNAFDK 639

Query: 680 EYTR 683
           E T+
Sbjct: 640 EITQ 643