Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 663 a.a., enterobactin receptor protein (RefSeq) from Shewanella sp. ANA-3

 Score = 84.3 bits (207), Expect = 2e-20
 Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 8/186 (4%)

Query: 6   VSAAVLSVLAAGFAHAETEPSHY-EEVVVTANRIEQPLSEVAGSVAVLEGETLEKQGKTE 64
           VSAA+L       A A  +     E +VVTA+  EQ + +   S++VL  E L+ +   +
Sbjct: 13  VSAALLLPATQVLADAAPDQDKMMERIVVTASGFEQQVRDAPASISVLTREDLDTRFYRD 72

Query: 65  LYDALNQEPGVSVTGGAGRPQNITIRGMTGNRIAIVRDGIQ--SADGYGAADINDKYGRN 122
           L DA+ + PGV VTGGA R ++I++RGM      I+ DG +  S +    +D     G  
Sbjct: 73  LTDAMLEVPGVVVTGGADR-RDISLRGMGSQYTLILVDGKRQSSRETRTNSDGPGVEGAW 131

Query: 123 TFSLSNVKQIQVVKGASSTLYGSGAIGGVV-IIESKAPEDYLYHRDYYVDAAL-TYSGIS 180
           T  L+ + +I++V+G  S+LYGS AIGGV+ II  K P +  +  +  +D  L   S   
Sbjct: 132 TPPLAAIDRIEIVRGPMSSLYGSDAIGGVINIITRKVPNE--WQGELRLDTTLQEKSDSG 189

Query: 181 NRYQGN 186
           N YQGN
Sbjct: 190 NVYQGN 195



 Score = 43.5 bits (101), Expect = 3e-08
 Identities = 44/193 (22%), Positives = 76/193 (39%), Gaps = 17/193 (8%)

Query: 502 NNKLRAETSDSFELGSKYD-NGQTQFYVAVFYSIFDNFID------VKQVGYDNATGSVI 554
           N  L+ ETS ++ELG   D          VFY+ F++ I        +     N  GS  
Sbjct: 455 NPDLQPETSVNYELGIYTDLTDSITTSAGVFYNEFEDKITRVACPATQCTDGPNQFGSDP 514

Query: 555 QQYQNIAGVKTYGAEMSVMHRLDDRWSVENKLGYVDGKDGENQY----VRTLTPLEGSVQ 610
             Y NI    T G E S+ +++    ++     Y D +     Y    +  L      + 
Sbjct: 515 TTYVNIDEAVTQGVEFSIDYKILSNLALTGNYTYTDSEQKTGAYKGSPLNQLPKHLVQLS 574

Query: 611 LNYQR-ERWDAYSRLNWASAMSRVPTCTTEQGKETECATTTGWVSWDIGLNYQWNAQLSA 669
           +NY+  ++   + R+N+    S+  T     G  +       +   D+G NY+ N  +  
Sbjct: 575 VNYEPIDKLSTWLRVNYRGEESQPTT-----GPSSSSLIAPSYTLLDLGANYRVNDSIKF 629

Query: 670 SFNVVNLLDREYT 682
           S  + N  D++ T
Sbjct: 630 SAGIYNAFDKDIT 642