Pairwise Alignments

Query, 665 a.a., S9 family peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., Protease II (EC 3.4.21.83) from Pseudomonas fluorescens FW300-N2E2

 Score =  273 bits (698), Expect = 2e-77
 Identities = 182/554 (32%), Positives = 282/554 (50%), Gaps = 21/554 (3%)

Query: 121 YYQLASWSLDRSVQSVALAEDTRGDEQFKLTIVRLA-DRTEQIVSETASTYFAWAADGKS 179
           ++ L ++S+    Q +A + DT GDE + L +  L+ D+  ++          WA D  +
Sbjct: 127 FFSLGAFSISPDHQRLAYSLDTTGDEIYTLFVKELSNDKVSELSFADCDGSMTWANDSLT 186

Query: 180 LYY--LSDLNGSTQLQRFELETGQSTRLAEWRSAEWLFSLYSASNPRYLVVQQNNENSTQ 237
           L++  L D +   +L R+ L+   +  +       +    Y +S+ + L++   ++ +++
Sbjct: 187 LFFGELDDTHRPHKLWRYRLDGTAAEEVFHEPDGRFFLHCYRSSSEKQLILSLGSKTTSE 246

Query: 238 QRLLDTQTGE-----LMPWLRTTEPGLEYYADVLGETLYINSNHQGA-FRLYRQP----L 287
             +LD    +     L P +   E  +++       T  I SN  G  F LY+       
Sbjct: 247 VWVLDAAQPQRPFTCLAPRVENHEYDVDHGLLDGQWTWLIRSNRDGINFALYQAADTGVA 306

Query: 288 HTKQDWQSVTTHKEIGSLSNFYLFDAGIVLVENQTLAPKVWVLDSQGEVRTHFELRDLGQ 347
            T+ DWQ++  H +   +    L +AG + +  +     +  +  QG      +L D   
Sbjct: 307 PTEADWQNLIPHSDTVMIDGLSL-NAGAMTLSLREGGLPIIEVHPQGLPAYRVQLPDAAY 365

Query: 348 VAWISRNGDAVSNRLRVRTMSMTEPASWHELDVAQLQWQQLSQDHY-ADFDPKQYQTQTV 406
              +  + + VS R+R+R  ++  PA   +LD+A      L Q      FD   Y +Q +
Sbjct: 366 SLHVQNSLEFVSERIRLRYEALNRPAQIRQLDLASGAQVVLKQTPVLGPFDADAYVSQRL 425

Query: 407 WVTQ-GAIQVPVTLAYRSDKLTPNSSVVLYGYGAYGVTMKPYFMPQIVSLLDRGMIYAIA 465
           W T     QVP++L  + + L     + LYGYGAYG ++ P+F    +SLLDRG+ +AIA
Sbjct: 426 WATAPDGTQVPISLVVKREALGRPVPLYLYGYGAYGESLDPWFSHSRLSLLDRGVAFAIA 485

Query: 466 HVRGGGYLGEAWHQAGAGLNKQNGIDDFLAAARYL--THFQQGERAIYTIGGSAGGTLVA 523
           HVRGGG LGEAW++AG   +K N   DF+A A +L    F   E+   + GGSAGG L+ 
Sbjct: 486 HVRGGGELGEAWYRAGKQEHKHNTFGDFIACAEHLIANGFTTAEQLAIS-GGSAGGLLIG 544

Query: 524 AALNQQPNLFAGAVLQVPFVDVLASMSDTSQALTAQQYQEWGNPQQPEQRQVMQAYDPLS 583
           A LNQ+P LF  A+ +VPFVDVL +M D    LT  +Y EWGNP++P+    ++AY P  
Sbjct: 545 AVLNQRPELFKVAIAEVPFVDVLNTMLDPDLPLTVTEYDEWGNPEEPDVYDRIRAYAPYE 604

Query: 584 NLRAAPYPPTLVNVGWWDNRVPYWEGARYLARLSDVSQGAGPYLLSTDFQAGHA--SDRR 641
           N+ A  YP  LV  G+ D+RV YWE A+++A+L        P LL T+  AGH   S R 
Sbjct: 605 NVSAQAYPALLVIAGYNDSRVQYWEAAKWVAKLRATKTDDHPLLLKTELGAGHGGMSGRY 664

Query: 642 QALEKQAREYAFFL 655
           Q L   A EYAF L
Sbjct: 665 QGLRDVALEYAFVL 678