Pairwise Alignments

Query, 665 a.a., S9 family peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., protease II (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  275 bits (702), Expect = 7e-78
 Identities = 198/671 (29%), Positives = 309/671 (46%), Gaps = 46/671 (6%)

Query: 23  DYQWLRDDSRSEPAVKQFLAEHNRKTDHWFAPAKPLVQELVNEWQQTSQHKAPPPALIYA 82
           DY W+RDD R +P V   L   NR T  +F P K L   L NE              + A
Sbjct: 35  DYYWMRDDKRQDPKVLAHLKAENRYTQAYFKPLKSLQDGLFNELT----------GRLVA 84

Query: 83  NQQYNDIQWNGHRH------------IVKIGAQGQIEPLLNLSARAEPFDYYQLASWSLD 130
           ++     QW+ H +            I + G++G  + +L+++ RA+  ++Y L   S+ 
Sbjct: 85  DESSVPYQWHQHSYYRRYQEGSEYPLIARKGSKGVEQLMLDVNERAKGHEFYGLGGVSVS 144

Query: 131 RSVQSVALAEDTRGDEQFKLTIVRLADRTEQI-VSETASTYFAWAADGKSLYYLS-DLNG 188
                +A  ED      + +    +        V E       W  D + ++Y++ DL  
Sbjct: 145 PDETMLAFGEDVLSRRVYNIYFKDIESGAMITDVLENTEGRIVWGNDNRHVFYIAKDLQT 204

Query: 189 --STQLQRFELETGQSTRLAEWRSAE--WLFSLYSASNPRYLVVQQNNENSTQQRLLDTQ 244
               ++ R EL T QS  +  +   +  +  SL  + +   +V+   +  +++  +LD  
Sbjct: 205 LLGNRVYRHELGTPQSRDVLVYEEQDDAYYISLGKSLDESQIVLFHESTTTSEVSVLDAN 264

Query: 245 TG-ELMPWLRTTEPGLEYYADVLGETLYINSNHQGA-FRLYRQPLHTKQD---WQSVTTH 299
               L   +   E G EY    LG++ Y+ +N Q   FRL +  +    D   WQ V  H
Sbjct: 265 DPLSLFKPVLAREEGHEYSVSKLGDSYYVLTNWQATNFRLMKVAIKDAADKSKWQEVVAH 324

Query: 300 KEIGSLSNFYLFDAGIVLVENQTLAPKVWVLDSQGEVRTHFELRDLGQVAWISRNGDAVS 359
                L +  +    +++   +    ++ V+   G+        +   V  +  N    S
Sbjct: 325 NPNARLEDELVLKDYLIIQTRENGLTRIKVMPFNGQKPFELSFDEPAYVLGLDVNAQQDS 384

Query: 360 NRLRVRTMSMTEPASWHELDVAQLQWQQLSQDHYA--DFDPKQYQTQTVWVT-QGAIQVP 416
           ++LRV   S+T P + +E  ++    + L +       FD   Y+ + V+VT +   +VP
Sbjct: 385 DKLRVFYSSLTTPETIYEYHLSNPDRRDLLKQEQVLGGFDAGAYRAERVFVTARDGAKVP 444

Query: 417 VTLAYRSDKLTPNSSVVLY--GYGAYGVTMKPYFMPQIVSLLDRGMIYAIAHVRGGGYLG 474
           V+L YR DK   + +  LY  GYG+YG T++P F   ++SLLDRG +YAIAHVRGG  LG
Sbjct: 445 VSLVYRKDKFKKDGTNPLYQYGYGSYGYTVEPDFSSSVISLLDRGFVYAIAHVRGGEMLG 504

Query: 475 EAWHQAGAGLNKQNGIDDFLAAARYLTHFQQGER-AIYTIGGSAGGTLVAAALNQQPNLF 533
             W+ AG  LNK+N   DF+     LT    G++  +   GGSAGG L+ A  N  P  +
Sbjct: 505 RPWYDAGKLLNKKNSFYDFIDVTTALTEQGYGDKNKVVAAGGSAGGLLMGAIANMAPEKY 564

Query: 534 AGAVLQVPFVDVLASMSDTSQALTAQQYQEWGNPQQPEQRQVMQAYDPLSNLRAAPYPPT 593
                 VPFVDV+ +M D S  LT  +Y EWGNP        M +Y P  N+    YP  
Sbjct: 565 FAIAAHVPFVDVVTTMLDESIPLTTNEYDEWGNPNDKTYFDYMLSYSPYDNVADHEYPHL 624

Query: 594 LVNVGWWDNRVPYWEGARYLARLSDVSQ-----GAGPYLLSTDFQAGHA--SDRRQALEK 646
           LV  G  D++V Y+E A+++A+L +V            L   D  AGH   S R +  + 
Sbjct: 625 LVTTGLHDSQVQYFEPAKWVAKLREVQNKWYKLDDKVLLFHVDMDAGHGGKSGRYRQYQD 684

Query: 647 QAREYAFFLTL 657
            A+EYAFFL+L
Sbjct: 685 TAQEYAFFLSL 695