Pairwise Alignments

Query, 665 a.a., S9 family peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 730 a.a., protease II PtrB from Caulobacter crescentus NA1000

 Score =  227 bits (578), Expect = 2e-63
 Identities = 195/664 (29%), Positives = 307/664 (46%), Gaps = 38/664 (5%)

Query: 23  DYQWLRDD---------SRSEPAVKQFLAEHNRKTDHWFAPAKPLVQELVNEWQ-QTSQH 72
           DY W++DD         S  +  VK+ L   N  T    AP + L   +  E + +  Q 
Sbjct: 60  DYAWMKDDNWQKVLRDPSLIKADVKEHLTAENAYTKAMLAPTEALQAAMFEEMKGRIKQD 119

Query: 73  KAPPPALIYANQQYNDIQWNGHR--HIVKIGAQGQIEPLLNLSARAEPFDYYQLASWSLD 130
            A  PA     + Y           H  K    G  E LL+    A+   +YQ+ + S  
Sbjct: 120 DASVPAKDGPFEYYTRYDKGAQHPVHARKPVGGGAEEVLLDEEKEAKGKAFYQVGAASHS 179

Query: 131 RSVQSVALAEDTRGDEQFKLTIVRLADRT---EQIVSETASTYFAWAADGKSLYY-LSDL 186
              +  A A D +G E F++ +  LA      E + S T    F ++ DG+ L++   D 
Sbjct: 180 PDHKLYAWAVDEQGSEVFRIHVKDLATGALLGEAVDSTTGD--FCFSPDGQWLFWTFRDD 237

Query: 187 NGS-TQLQRFELETGQSTRLAEWRSAE--WLFSLYSASNPRYLVVQQNNENSTQQRLLDT 243
           NG   ++ R  ++      +  +   +  +   +  +S+ +Y+V+   N+ +++  L+  
Sbjct: 238 NGRPAKIYRRPIKGAAKDDVLIYDEPDEGFFIGVGVSSSEKYVVISCGNQETSEALLIPA 297

Query: 244 QTGELMPWL-RTTEPGLEYYADVLGETLYINSNHQGA--FRLYRQPLHT--KQDWQSVTT 298
                 P +    E GL Y  +   +   I +N  GA  ++L   P     K +W+    
Sbjct: 298 ANPTAKPVVFHPREVGLRYEVEHWNDHWVIRTNADGAVDWKLVTTPETATGKANWKDWVA 357

Query: 299 HKEIGSLSNFYLFDAGIVLVENQTLAPKVWVLDSQGEVRTHFELRDLGQVAWISRNG-DA 357
           HK    +S    + A  V +E      +V V    G    H    D    A     G + 
Sbjct: 358 HKPGRLISGTMAYKAWFVRLEKVDALNRVVVTAQDGA--EHAIAFDEAAYALSLEGGYEY 415

Query: 358 VSNRLRVRTMSMTEPASWHELDVAQLQWQ-QLSQDHYADFDPKQYQTQTV--WVTQGAIQ 414
            ++ +R    SMT P  W + D+   Q   + +Q+  +  DP +Y+T+ +      GA +
Sbjct: 416 DTDTVRFVYNSMTTPRQWFDYDMKSRQRTLRKTQEIPSGHDPSKYETRRLNAKAADGA-E 474

Query: 415 VPV-TLAYRSDKLTPNSSVVLYGYGAYGVTMKPYFMPQIVSLLDRGMIYAIAHVRGGGYL 473
           VP+  L  +  KL  ++ ++LYGYG+YG++M+P F  +  SL+DRG I+A A  RGG   
Sbjct: 475 VPIFVLMKKGTKLDGSAPLLLYGYGSYGISMEPNFSIRNFSLVDRGWIWATACPRGGSEK 534

Query: 474 GEAWHQAGAGLNKQNGIDDFLAAARYLTHFQQGERA-IYTIGGSAGGTLVAAALNQQPNL 532
           G +W   G    K+N   DF+A A +L     G+ A     GGSAGG L+ A  N +P+L
Sbjct: 535 GWSWFLDGKKFKKKNTFTDFIACAEHLHAAGYGKPASTVAYGGSAGGLLMGAITNMRPDL 594

Query: 533 FAGAVLQVPFVDVLASMSDTSQALTAQQYQEWGNP-QQPEQRQVMQAYDPLSNLRAAPYP 591
           FAG +  VPFVDV+ +MSDT+  LT  ++ EWGNP +  E    + +Y P  N+   PYP
Sbjct: 595 FAGIIAAVPFVDVVNTMSDTTLPLTPPEWPEWGNPLEDKEAYDYIASYSPYDNIGPKPYP 654

Query: 592 PTLVNVGWWDNRVPYWEGARYLARLSDVSQGAGPYLLSTDFQAGH--ASDRRQALEKQAR 649
             L   G  D RV YWE  +++A+L   +    P LL  + +AGH  AS R   L++ A 
Sbjct: 655 AILATGGLSDPRVTYWEPQKWVAKLRPATTSGNPVLLKINMEAGHGGASGRFDFLKEIAL 714

Query: 650 EYAF 653
           +YAF
Sbjct: 715 DYAF 718