Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  250 bits (638), Expect = 7e-71
 Identities = 162/443 (36%), Positives = 240/443 (54%), Gaps = 13/443 (2%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   LL+ L    ++  T +Q QAIP  +AGRDL+A+++TG+GKT  F LP+L
Sbjct: 1   MTFASLGLIEPLLRALEALGYQTPTPVQTQAIPPVLAGRDLMAAAQTGTGKTAGFALPLL 60

Query: 65  HK-SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKA 123
            + +++    +    R L+L PTRELA QV+  +R     L  T     GG + N Q+  
Sbjct: 61  QRLTMEGPKVAPNSIRALVLAPTRELADQVHESIRQYAEHLPLTTYAAYGGVSINPQMMK 120

Query: 124 LARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRR 183
           L RG   +VATPGRL D     ++    L+TL+LDEADRMLDLGFA+ELR I+ A   ++
Sbjct: 121 LRRGVDVLVATPGRLLDLHRQNAVKFSQLQTLILDEADRMLDLGFAEELRGIY-AVLPKQ 179

Query: 184 RQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDR 243
           RQTL+FSAT    ++  +A ++LN+P  I +   +     + Q     D    K  L   
Sbjct: 180 RQTLLFSATFSD-EIRLLAAQMLNDPLTIEVSPRNVAASSVKQWVVTVDK-KRKADLFIH 237

Query: 244 ILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKI 303
           ++    + QV++F  TR   D+L ++L    + A  + G+  Q  R   + +F+    KI
Sbjct: 238 LMKKHRWGQVLVFAKTRVGVDQLVDRLQALGMNADGIHGDKPQATRQRALDRFKSNEVKI 297

Query: 304 LVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFK 363
           LV TDVA+RGLDI  +  V+N D+P   E+Y+HR+GRTGRAG  G+A+SLV   + E   
Sbjct: 298 LVATDVAARGLDIDDLPTVVNLDLPIVAEDYIHRIGRTGRAGLTGEAISLVCADEVELLS 357

Query: 364 RVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKA-APTQRVNKAKAPSKSKKAAPRDKSF 422
            +E   +Q ++         + +  +P    P   A  Q + K K P KSK +  + ++ 
Sbjct: 358 AIEVLTRQTLE-------RKEEQDFEPEHRVPSTDASGQILKKPKKPKKSKVSGSK-RNL 409

Query: 423 YQNVAVGDSVFIPKKKVAPKPEV 445
            + V  GDS   P  K   K  V
Sbjct: 410 GKWVDSGDSEPAPVVKPVRKVPV 432