Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  287 bits (735), Expect = 4e-82
 Identities = 172/435 (39%), Positives = 252/435 (57%), Gaps = 3/435 (0%)

Query: 7   FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
           F +  L  RLLK +A   F + T +Q  AIPL + GRDL  +++TGSGKT AFVLP+L++
Sbjct: 2   FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61

Query: 67  SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALAR 126
            L   A    D R +IL+PTRELA+Q   E+          A LITGGE+F  Q   L +
Sbjct: 62  -LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRK 120

Query: 127 GPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRRQT 186
            P  ++ TPGRL + L+  +L L+ +E LVLDEADRMLD+GF++++ R+      R  QT
Sbjct: 121 VPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGRE-QT 179

Query: 187 LMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRILA 246
           ++FSAT   A + +M  ++L +P+ + +   SE            DH  HKE +L+ +LA
Sbjct: 180 MLFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWLLA 239

Query: 247 DAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKILVT 306
           +  Y++ IIFT T+A  DRL  +L     KA  L G+ +Q  R   + + ++   KI+V 
Sbjct: 240 NETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVA 299

Query: 307 TDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKRVE 366
           TDVA+RGLD+  +  VINFDMP+  ++YVHRVGRTGRAG+ G A+SL+   DW     VE
Sbjct: 300 TDVAARGLDVEGLDMVINFDMPRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSVE 359

Query: 367 AFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKAKAPSKSKKAAPRDKSFYQNV 426
            +L+Q  +  V+  ++G + G K  +A  KA   ++  K  A    KK A +  +  + V
Sbjct: 360 RYLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKK-KKTDAKGDKKKVAAKGPTKRKTV 418

Query: 427 AVGDSVFIPKKKVAP 441
               S  + +  +AP
Sbjct: 419 NRPKSDLVSQDGMAP 433