Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  270 bits (691), Expect = 8e-77
 Identities = 156/424 (36%), Positives = 243/424 (57%), Gaps = 11/424 (2%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   L++ +    + Q T +QQ+AIP  + GRDL+ +++TG+GKT  F LP+L
Sbjct: 1   MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query: 65  HKSL------KTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFN 118
            +        K++    + PR L+L PTRELA QV+   +     L + +  I GG   N
Sbjct: 61  ERLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMN 120

Query: 119 DQVKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNA 178
            QV+A++RG   +VA PGRL D     S+ L  +E LVLDEADRMLD+GF  +++++  A
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVL-A 179

Query: 179 AKHRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKE 238
               +RQ L+FSAT  + D+  +A +LL+ P+RI +   +   + I Q  +     +HK 
Sbjct: 180 RLPAKRQNLLFSATFSN-DITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLA-ANHKR 237

Query: 239 ALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFER 298
           +LL  ++    + QV++FT T+   +RL E L+++ L AVA+ GN +Q  R   +  F+ 
Sbjct: 238 SLLAHLITVGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKA 297

Query: 299 AVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKD 358
              +I+V TD+A+RGLDI  + HV+NF++P   E+YVHR+GRTGRAG  G+A+SLV P +
Sbjct: 298 GDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDE 357

Query: 359 WESFKRVEAFLQQEIQFEVLAGLE-GKFKGLKPR-QAKPKAAPTQRVNKAKAPSKSKKAA 416
            +  K +E   +Q+I    L G +    +  KP  + +P    ++    A+         
Sbjct: 358 EKLLKSIERMTKQKIADGDLMGFDITAVEAEKPEVRERPDVRNSRGARPARGDGDKNNGG 417

Query: 417 PRDK 420
            RDK
Sbjct: 418 RRDK 421