Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  245 bits (626), Expect = 2e-69
 Identities = 142/371 (38%), Positives = 211/371 (56%), Gaps = 5/371 (1%)

Query: 7   FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
           F DLGL  ++L  +    +   T IQ  AIP  +  RD+L  ++TG+GKT +FVLPML  
Sbjct: 4   FADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPMLTL 63

Query: 67  SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALAR 126
             K +A  A+ PR LIL PTRELA QV                L+ GG +F++Q + L R
Sbjct: 64  LEKGRA-RARMPRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKLER 122

Query: 127 GPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRRQT 186
           G   ++ TPGRL DH +   L + G+E LV+DEADRMLD+GF  ++ RI       R QT
Sbjct: 123 GADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTR-QT 181

Query: 187 LMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKE--ALLDRI 244
           L FSAT+   ++  +A   L  P+R+ +   S     +TQ F      D+++   L + I
Sbjct: 182 LFFSATMP-PEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRAVLRELI 240

Query: 245 LADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKIL 304
            +  + +  IIF   + D   L   L+++     AL G+++Q  R  ++  F+    K+L
Sbjct: 241 RSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLL 300

Query: 305 VTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKR 364
           V +DVA+RGLDIP V+HV NFD+P H E+YVHR+GRTGRAG  G A ++V  ++ +    
Sbjct: 301 VASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRETKFSDA 360

Query: 365 VEAFLQQEIQF 375
           +E  + Q++++
Sbjct: 361 IEKLIGQKVEW 371