Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., DEAD-box ATP dependent DNA helicase (RefSeq) from Shewanella amazonensis SB2B

 Score =  267 bits (682), Expect = 7e-76
 Identities = 152/417 (36%), Positives = 237/417 (56%), Gaps = 4/417 (0%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   +LK L H  +K  + IQ QAIP+ + GRDLLA+++TG+GKT  F LP+L
Sbjct: 1   MSFASLGLSAPILKALDHKGYKTPSPIQAQAIPVVLEGRDLLAAAQTGTGKTAGFTLPLL 60

Query: 65  HKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
               +T+    K  R LIL PTRELA Q+   + +    L   +T++ GG     Q+  L
Sbjct: 61  ELLSQTQKAGPKQVRALILTPTRELAAQIADNITAYSKYLPLKSTVVFGGVGIGPQITTL 120

Query: 125 ARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRR 184
            RG   +VATPGRL D     ++   GLE LVLDEADRMLD+GF  +++RI       +R
Sbjct: 121 RRGIDILVATPGRLLDLHQQNAVSFHGLEILVLDEADRMLDMGFIHDIKRILKLLP-AKR 179

Query: 185 QTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRI 244
           Q L+FSAT    ++  +A  LL+    +++   +   + + Q     D  + K ALL  +
Sbjct: 180 QNLLFSATFS-PEIRTLAHGLLHNAAEVSVTPRNSAAESVKQWIVPVDK-NQKPALLAEL 237

Query: 245 LADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKIL 304
                ++QV++F  T+   +RL  +++   +KA A+ GN +Q  R   +  F+R   ++L
Sbjct: 238 TRFYRWQQVLVFCRTKHGANRLVRQMDAEGIKAAAIHGNKSQNARTQALADFKRGAIRML 297

Query: 305 VTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKR 364
           + TD+A+RG+DI  + +V+NF++P   E+YVHR+GRTGRAG  G+A SLV  ++ +  + 
Sbjct: 298 IATDIAARGIDISELPNVVNFELPHVPEDYVHRIGRTGRAGASGEAASLVCNEEAKQLRD 357

Query: 365 VEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKAKAPSKSKKAAPRDKS 421
           +E  ++Q +  +   G E    GL P + + K+ P      AK  +KS+   P+ +S
Sbjct: 358 IERLIKQSLPRKEFVGFE-PVHGLPPSENQGKSKPGGSKQGAKPGNKSQGRKPQGQS 413