Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., DEAD-box ATP dependent DNA helicase (RefSeq) from Shewanella amazonensis SB2B

 Score =  251 bits (641), Expect = 3e-71
 Identities = 156/407 (38%), Positives = 228/407 (56%), Gaps = 12/407 (2%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F    L + L  NLA   F + TE+Q  AIP+ +AG DL+  + TG+GKT AF+LP+L
Sbjct: 1   MSFAAFTLPSPLANNLAKLGFVEPTEVQAGAIPMMLAGDDLMVKAATGTGKTAAFLLPIL 60

Query: 65  HKSLKTKAFSAK--DPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVK 122
            + L  +  S     PR L+LVPTREL +QVY   +++  G +     + GG     Q+ 
Sbjct: 61  ARLLADEVASRNLPAPRALVLVPTRELCQQVYDAAKALAKGSAVRIAQVYGGVPLESQLN 120

Query: 123 ALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHR 182
           A+  G   +VATPGRL DHL  R+L ++ +  LV DEADRMLD+GF  E+R +      +
Sbjct: 121 AIKGGVDLMVATPGRLLDHLKKRTLRIDTVSQLVFDEADRMLDMGFEDEIRALVKKLA-K 179

Query: 183 RRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLD 242
            RQT +FSATL   +V  +A  L++ PK + I    +    I +  Y  D  + K   + 
Sbjct: 180 TRQTALFSATLGD-NVWQLAKSLMDSPKLLEIAAAKDAKPLIEEQVYQLDS-ERKFEFIC 237

Query: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302
            +L    + QV+IF+ T+   D+LT KL +    AVA+  +L+Q QR   +  F+ A  +
Sbjct: 238 HLLGKNSWSQVLIFSRTKEGADKLTAKLVEAGHSAVAMHADLSQRQREQNLADFKAADAR 297

Query: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362
           +LV TDVA+RGLDI A+  +IN ++P   E+YVHR+GRTGRAG+ G A+SL+   D    
Sbjct: 298 VLVATDVAARGLDIQALPCIINVELPFKKEDYVHRIGRTGRAGSAGLAISLLDVADEPLL 357

Query: 363 KRVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKP----KAAPTQRVNK 405
             +E +L + +  +   G E     L  R  +P    KAA  Q+  K
Sbjct: 358 VALEHYLDRRLPQQWYPGFE---PDLSIRHERPHSLSKAAQKQKARK 401