Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., DEAD/DEAH box helicase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  502 bits (1292), Expect = e-146
 Identities = 265/454 (58%), Positives = 323/454 (71%), Gaps = 9/454 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           +QF D  LD RL+++L H   +  T IQ QAIP+ +AG+DL+ASSKTGSGKTLAF+LP +
Sbjct: 1   MQFSDFSLDKRLMQSLKHMGIETPTPIQSQAIPVALAGKDLMASSKTGSGKTLAFLLPAM 60

Query: 65  HKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
            + + +KA S KDPR LIL+PTRELA+QVY +LR ++    Y A  + GGENFNDQ KAL
Sbjct: 61  QRVISSKALSKKDPRVLILLPTRELAQQVYAQLRLLVANTQYRAISVLGGENFNDQAKAL 120

Query: 125 ARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRR 184
           AR P FIVATPGR+ADHL  R LFL GLE LVLDEADRMLDLGFA +L+ I+ AA HRRR
Sbjct: 121 AREPHFIVATPGRIADHLQQRHLFLNGLELLVLDEADRMLDLGFAPQLKAINAAADHRRR 180

Query: 185 QTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRI 244
           QTLMFSATL+H +V+++A ELL EP+ +AI      H DI Q   L DHL+HKEALL+R+
Sbjct: 181 QTLMFSATLEHGEVHELAAELLKEPEHVAIDAVHLGHGDIEQQILLADHLEHKEALLERL 240

Query: 245 LADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKIL 304
           L+   +RQV+IFTATR DT+RL   L +      ALSG L Q QRN IM  F R   +IL
Sbjct: 241 LSGNNFRQVMIFTATRQDTERLATLLAEKGYNTAALSGELRQAQRNQIMDSFSREHHRIL 300

Query: 305 VTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKR 364
           VTTDVASRGLDI  V+ V+NFDMPK  EEYVHR+GRTGRAGNKG A+SLVGPKDW++F +
Sbjct: 301 VTTDVASRGLDISNVSLVVNFDMPKFAEEYVHRIGRTGRAGNKGTAISLVGPKDWDNFLK 360

Query: 365 VEAFLQQEIQFEVLAGLEGKFKGLKPRQ------AKPKAAPTQRVNKAKAPSKSKKAAPR 418
           V+  LQ+  +F VL GLE KFKGL P++      AK KAA   +   A AP   K++  R
Sbjct: 361 VQILLQKTFEFSVLEGLEAKFKGLAPKRERKDAGAKAKAAGKTKRQTADAPKGEKRS--R 418

Query: 419 DKSFYQNVAVGDSVFIPKKKVAPKPEVDLEDDID 452
           DK F   V VGD+  I +KK  P P V  +DD D
Sbjct: 419 DKRFLTGVDVGDAPMI-RKKPLPAPIVPEDDDAD 451