Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 799 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  240 bits (613), Expect = 1e-67
 Identities = 145/375 (38%), Positives = 215/375 (57%), Gaps = 16/375 (4%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F DLGL    L+ +    +   T IQ QAIP    GRD+L  ++TG+GKT +F LPM+
Sbjct: 1   MTFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMI 60

Query: 65  HKSLKTKAFSAKDPRGLILVPTRELAKQV------YGELRSMLGGLSYTATLITGGENFN 118
                 KA  A+ PR LIL PTRELA QV      YG+ + +      +  L+ GGE+ N
Sbjct: 61  DILASGKA-KARMPRSLILAPTRELATQVSENFTLYGKYQKL------SMALLIGGESMN 113

Query: 119 DQVKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNA 178
           +Q K L RG   ++ATPGRL D  +  S+ L  ++ LV+DEADRMLD+GF  ++ RI  A
Sbjct: 114 EQQKVLDRGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIV-A 172

Query: 179 AKHRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKE 238
              + RQTL FSAT+D  ++  +A   L  PK + I    +  + + Q   +    + +E
Sbjct: 173 LLPKIRQTLFFSATMDK-EIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKRE 231

Query: 239 ALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFER 298
           AL  ++L         IF   + D D L + L+ +    +AL G++ Q  R   + +F+R
Sbjct: 232 ALR-QLLRRETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKR 290

Query: 299 AVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKD 358
           A  +++V +DVA+RG+D+  V+HV NFD+P H E+Y+HR+GRTGRAG  G A +L  P+D
Sbjct: 291 AEVQLMVCSDVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPED 350

Query: 359 WESFKRVEAFLQQEI 373
            +  + +E  L + I
Sbjct: 351 AKYLRAIENLLGKTI 365