Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  239 bits (611), Expect = 9e-68
 Identities = 142/376 (37%), Positives = 217/376 (57%), Gaps = 10/376 (2%)

Query: 6   QFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLH 65
           +F  L L   L + +    +  AT IQ  AIP  + GRD+L  ++TG+GKT +FVLP+L 
Sbjct: 3   EFASLDLIEPLARAVTALGYTVATPIQAGAIPPQLLGRDVLGIAQTGTGKTASFVLPLLQ 62

Query: 66  KSLKTKAFSAKD-PRGLILVPTRELAKQV---YGELRSMLGGLSYTATLITGGENFNDQV 121
           +  K         PR LIL PTRELA+Q+    G+L   L  +     ++ GG +   Q 
Sbjct: 63  RLTKDPQPRVPGRPRALILTPTRELAQQITESIGDLGRTLSAIR--CGVVVGGVDILRQT 120

Query: 122 KALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKH 181
           + + RG   +VATPGRL D ++ +++ L  +E LVLDEADRMLD+GFA  +++I  A   
Sbjct: 121 RMVQRGLEILVATPGRLQDLMNRKAVDLRAIEVLVLDEADRMLDMGFAPAVKKIA-AVLP 179

Query: 182 RRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALL 241
           R+RQT+MFSATL + +V  +   L+N+P R+ +   +     I Q     +  + ++ LL
Sbjct: 180 RKRQTVMFSATLPN-EVTGLVASLMNDPVRVEVAPAASVANRIDQRVLFVEQTNKRKLLL 238

Query: 242 DRILADA-EYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAV 300
           D +L DA +  + I+FT T+   ++L   L +  +K+  + GN +Q  R   +  F+   
Sbjct: 239 D-LLGDARKVERAIVFTRTKHGANKLGIFLLEYGVKSDVIHGNKSQGARQRALNDFKSGK 297

Query: 301 FKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWE 360
            + LV TD+A+RG+D+  +THVINFD+P   E YVHR+GRT RAG  G A+SL  P++  
Sbjct: 298 VRALVATDIAARGIDVDGITHVINFDLPNEPESYVHRIGRTARAGAAGIALSLCAPQEMP 357

Query: 361 SFKRVEAFLQQEIQFE 376
             K +E  ++  I  +
Sbjct: 358 YLKAIEKVIKSRIDVD 373