Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., putative ATP-dependent RNA helicase RhlE from Phaeobacter inhibens DSM 17395

 Score =  253 bits (647), Expect = 8e-72
 Identities = 157/428 (36%), Positives = 235/428 (54%), Gaps = 28/428 (6%)

Query: 6   QFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLH 65
           +F DL L+ ++LK +    ++  T IQ  AIP  + GRD+L  ++TG+GKT +F LPM+ 
Sbjct: 3   KFSDLNLNPKVLKAIEEAGYESPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMIT 62

Query: 66  KSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALA 125
              + +A  A+ PR L+L PTRELA QV     +    L  T  L+ GG +F +Q   + 
Sbjct: 63  LLARGRA-RARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDTLID 121

Query: 126 RGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRRQ 185
           +G   ++ATPGRL DH +   L L  ++ +V+DEADRMLD+GF  ++ RI       R Q
Sbjct: 122 KGVDVLIATPGRLLDHFERGKLILSDVKVMVVDEADRMLDMGFIPDIERIFGLTPFTR-Q 180

Query: 186 TLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLC-----DHLDHKEAL 240
           TL FSAT+   ++  +    L+ P R+ +   +   ++ITQ   L      D    ++  
Sbjct: 181 TLFFSATMA-PEIERITNTFLSAPARVEVARQATTSENITQGVVLFKASRRDREGSEKRK 239

Query: 241 LDRILADAEYRQ---VIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFE 297
           L R L D E  +    IIF   + D D + + L +    A  + G+L+Q+QR   +  F 
Sbjct: 240 LLRHLIDQEGEKCTNAIIFCNRKTDVDIVAKSLKKYGYDAAPIHGDLDQSQRTKTLEGFR 299

Query: 298 RAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPK 357
               + LV +DVA+RGLD+P+V+HV NFD+P H E+YVHR+GRTGRAG  G AM +  PK
Sbjct: 300 EGSLRFLVASDVAARGLDVPSVSHVFNFDVPSHAEDYVHRIGRTGRAGRDGSAMMICVPK 359

Query: 358 DWESFKRVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKA---------APTQRVNKAKA 408
           D ++ + +E  +Q EI       +E     LK  +A+PKA           T+R  +++ 
Sbjct: 360 DEKNLEDIERLVQNEI-----PRIENP---LKKAKAEPKAKDSKDDASSETTERKTRSRR 411

Query: 409 PSKSKKAA 416
           PS    AA
Sbjct: 412 PSARSSAA 419