Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  495 bits (1275), Expect = e-144
 Identities = 260/448 (58%), Positives = 316/448 (70%), Gaps = 6/448 (1%)

Query: 3   STLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLP 62
           + LQF D  LD RLL +L H      TEIQ Q+IP+ ++GRDL+ASSKTGSGKTLAF+LP
Sbjct: 12  TALQFSDFSLDKRLLTSLEHMGIDTPTEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLP 71

Query: 63  MLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVK 122
            + + + TKA S +DPR LIL+PTRELA QVY +LR ++    Y A  I GGENFNDQ K
Sbjct: 72  AMQRVIATKALSKRDPRVLILLPTRELATQVYSQLRLLVANTQYKAIKILGGENFNDQAK 131

Query: 123 ALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHR 182
           ALAR P F+VATPGRLADHL  R L+L GLE L+LDEADRMLDLGFA++LR I+ AA H+
Sbjct: 132 ALARDPHFVVATPGRLADHLAQRHLYLNGLELLILDEADRMLDLGFAEQLRAINQAADHK 191

Query: 183 RRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLD 242
           RRQTLMFSATLDH  +N++A ELL EP+ +AIG    E++DI Q  YLCD+L HKE LL 
Sbjct: 192 RRQTLMFSATLDHGQINEIAAELLKEPEHVAIGASHVENQDIAQKIYLCDNLSHKEQLLT 251

Query: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302
           R+L    ++QVIIFTATR DTDRL   L +      +LSG L Q  RN IM QF R   +
Sbjct: 252 RLLQLEPHKQVIIFTATRGDTDRLAGVLAEQGFSTSSLSGELKQAARNQIMDQFSRGQQQ 311

Query: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362
           ILVTTDVASRGLD+  V+ VINFDMPK  EEY+HR+GRTGRAG KGDA+SLVGPKDW +F
Sbjct: 312 ILVTTDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRAGAKGDAISLVGPKDWVNF 371

Query: 363 KRVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQ----RVNKAKAPSKSKKAAPR 418
           K+V+ FL++  +F  L  L  KFKGLK + ++ K    Q    +   AKA S +K   PR
Sbjct: 372 KQVQNFLRKSFEFSELEELAPKFKGLKDKPSQEKRLGKQQAKPKAKTAKAASSTKPTKPR 431

Query: 419 DKSFYQNVAVGDSVFI--PKKKVAPKPE 444
           DK F   V VGD+  +  PK K+   PE
Sbjct: 432 DKRFITGVDVGDAPMLRKPKAKLQDTPE 459