Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  256 bits (655), Expect = 8e-73
 Identities = 160/414 (38%), Positives = 232/414 (56%), Gaps = 12/414 (2%)

Query: 3   STLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLP 62
           ST  F  L L   L   L H  ++QAT IQ +AIP  +AGRDLLA +KTGSGKT AF LP
Sbjct: 22  STTDFSQLNLVKALQARLHHLGYQQATPIQAKAIPAILAGRDLLAGAKTGSGKTAAFALP 81

Query: 63  MLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLIT--GGENFNDQ 120
           +L K +  +A        L+LVPTRELA+QV     S    L+  A +I   GG + N Q
Sbjct: 82  LLQKLVGQRAGGGNHVGALVLVPTRELAQQVADSFISYGAELAPRAKVIAVFGGVSVNSQ 141

Query: 121 VKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAK 180
           + AL  G   +VATPGRL D L   ++ L  L+ LVLDEADRML+LGF +EL  I     
Sbjct: 142 MLALRGGADILVATPGRLLDLLGSNAVKLSQLKALVLDEADRMLNLGFTEELGEILKQLP 201

Query: 181 HRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEAL 240
            ++ QTL+FSAT    +V  +  +LL +P  + I +   +  DI Q  Y  +   +K AL
Sbjct: 202 DQK-QTLLFSATFPE-EVLSLTAKLLTDP--VEIQMQEAQSADIEQRVYTVNR-SNKTAL 256

Query: 241 LDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAV 300
           L  ++   ++RQV++F + +   D L +KL +  + A    G+  Q  R+ ++  F+   
Sbjct: 257 LAELIKVRQWRQVLVFASAKRSCDHLAQKLEKRGISAQVFHGDKAQGARSRVLDGFKNGE 316

Query: 301 FKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWE 360
             +L+ TD+A+RG+DI  +  VINF++P+   +Y+HR+GR+GRAG  G+A+SL+   ++ 
Sbjct: 317 ITVLIATDIAARGIDIDKLPVVINFELPRSPADYLHRIGRSGRAGETGEAISLISHDEYH 376

Query: 361 SFKRVEAFLQQEIQFEVLAGLEGKFKG---LKPRQAKPKAAP--TQRVNKAKAP 409
            FK +E   +  +  E   G E   +       RQ KP A P  T +  + K P
Sbjct: 377 HFKVIEKKNKLRLPREQYPGFEADAEAPLDCPSRQDKPMAKPEGTGKKKRKKLP 430