Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  241 bits (614), Expect = 4e-68
 Identities = 141/393 (35%), Positives = 227/393 (57%), Gaps = 4/393 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           ++F+       +L  ++   +++ T IQ++AIP    G+D+LAS++TG+GKT AF LP+L
Sbjct: 1   MRFESFSFAPEILHAISECGYQKMTPIQKEAIPAIRRGQDVLASAQTGTGKTAAFALPIL 60

Query: 65  HKSLKTKAFSAK-DPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKA 123
            K   + + + + + R LIL PTREL  QV   ++     L  +   + GG   + Q   
Sbjct: 61  QKMFDSPSDTQRSNTRALILAPTRELVAQVADNIKQYSRYLPISVLTVYGGVKMDTQAAK 120

Query: 124 LARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRR 183
           + +G   IVATPGRL +HL   +L L  ++ LVLDEADRMLD+GF  ++++I     +R 
Sbjct: 121 VKKGADIIVATPGRLLEHLQACNLNLSNVDFLVLDEADRMLDMGFITDIQKILQQV-NRD 179

Query: 184 RQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDR 243
           RQ L+FSAT   A V  +A E+L +PK IA+   +     ++Q  Y  +    +E LL  
Sbjct: 180 RQNLLFSATFSSA-VKQLANEMLVKPKLIAVDKQNTTAVTVSQVVYPVEQRRKRE-LLSE 237

Query: 244 ILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKI 303
           ++    ++QV++FTATR   D L ++LN + + +  +     Q  R   + +F+    + 
Sbjct: 238 LIGKKNWQQVLVFTATREAADVLVKELNLDGIPSAVVHSEKAQGNRRRALREFKEGKVRA 297

Query: 304 LVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFK 363
           LV T+VA+RGLDIP + +V+NFD+P   E+YVHR+GRTGRAG  G A+SLV  ++  +  
Sbjct: 298 LVATEVAARGLDIPELEYVVNFDLPFLAEDYVHRIGRTGRAGRTGVAISLVSREEERTLA 357

Query: 364 RVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPK 396
            +E  +  +I+   + G E   + L  +Q + +
Sbjct: 358 DIEKLIGNKIRRITIPGYEVGSRDLLIKQLQKR 390