Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  248 bits (632), Expect = 4e-70
 Identities = 148/426 (34%), Positives = 234/426 (54%), Gaps = 20/426 (4%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   +LK +A   ++  + IQ QAIP  ++G+D++A+++TG+GKT  F LP+L
Sbjct: 1   MSFTSLGLSAPILKAVADKGYQTPSPIQAQAIPAVLSGKDVMAAAQTGTGKTAGFTLPLL 60

Query: 65  HKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
               +     +K  R L+L PTRELA Q+   + +    L   + ++ GG   + Q+  L
Sbjct: 61  ELLSQGPRARSKQVRALVLTPTRELAAQIAESVTTYGQHLPLRSAVVFGGVGISPQISQL 120

Query: 125 ARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRR 184
            RG   +VATPGRL D     ++    LETLVLDEADRMLD+GF  ++++I  A    +R
Sbjct: 121 KRGVDILVATPGRLLDLYQQDAVSFSQLETLVLDEADRMLDMGFIHDIKKI-LAILPPKR 179

Query: 185 QTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRI 244
           Q LMFSAT    ++  +A  L+N P  I++   +     + Q     D  + K A L ++
Sbjct: 180 QNLMFSATFSD-EIRTLAKGLVNNPVEISVTPRNSTANTVQQLICPVDK-NKKSAALVKL 237

Query: 245 LADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKIL 304
           +   +++QV++F+ T+   +RL + L    + A A+ GN +Q  R   +  F+    ++L
Sbjct: 238 IQQGDWQQVLVFSRTKHGANRLAKHLEAKGITAAAIHGNKSQGARTKALANFKSGDVRVL 297

Query: 305 VTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKR 364
           V TD+A+RGLDI  +  V+NFD+P   E+YVHR+GRTGRAG  G A+SLV  ++ +    
Sbjct: 298 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGADGKAVSLVSDEEAKLLAD 357

Query: 365 VEAFLQQEIQFEVLAGLE---------------GKFKGLKPRQAKPKAAPTQRVNKAKAP 409
           +E  + + +    + G E               G+ KG  PR  KPK+   +  N++   
Sbjct: 358 IERLIGKLLPRAEVEGFEPTHTLPETNLTPKRHGQHKG--PRNPKPKSNSQRSSNRSSNG 415

Query: 410 SKSKKA 415
            +S KA
Sbjct: 416 QRSDKA 421