Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis JJ

 Score =  243 bits (621), Expect = 8e-69
 Identities = 142/371 (38%), Positives = 218/371 (58%), Gaps = 8/371 (2%)

Query: 7   FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAG-RDLLASSKTGSGKTLAFVLPMLH 65
           FK+LGL + +L+ L    F   T IQ+QAIP+ I G RD++  ++TG+GKT AF +P+L 
Sbjct: 4   FKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL- 62

Query: 66  KSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALA 125
              +T    +++ + LIL PTRELA QV  E+ S+ G        + GG++ + Q++ L 
Sbjct: 63  ---ETIDEHSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELR 119

Query: 126 RGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRRQ 185
           RG + +V TPGR+ DH+  R++ LE +  +VLDEAD ML++GF  ++  I  +    +R 
Sbjct: 120 RGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRM 179

Query: 186 TLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRIL 245
            L+FSATL  + +  +A   + E   I +           Q FY   H   K  LL RI+
Sbjct: 180 -LLFSATLPDS-IMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEI-HSRDKFELLSRII 236

Query: 246 ADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKILV 305
              +    +IF  T+AD D +  +LN+    A  L G++ Q QR   + +F+     +LV
Sbjct: 237 DTEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLV 296

Query: 306 TTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKRV 365
            TDVA+RG+DI  +THV+NFD+P++ E YVHR+GRTGRAG +G A++ V P ++  FK +
Sbjct: 297 ATDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYI 356

Query: 366 EAFLQQEIQFE 376
           +   + EI+ E
Sbjct: 357 QKIAKTEIKRE 367