Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., ATP-dependent RNA helicase DbpA (RefSeq) from Shewanella sp. ANA-3

 Score =  245 bits (625), Expect = 3e-69
 Identities = 145/381 (38%), Positives = 215/381 (56%), Gaps = 8/381 (2%)

Query: 2   ESTLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVL 61
           + ++ F  L L   LL+NL    + + T IQ Q++P  +AG D++   KTGSGKT AF L
Sbjct: 19  QPSMAFSTLKLKPELLENLTTMGYHEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGL 78

Query: 62  PMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATL-ITGGENFNDQ 120
            +L+K L  K F  +    L+L PTRELA QV  E+R++  G+     L + GG     Q
Sbjct: 79  GLLNK-LDVKRFRIQT---LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQ 134

Query: 121 VKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAK 180
           + +L  G   IV TPGR+ DHL+   L L  L  LVLDEADRML++GF  +L  I   + 
Sbjct: 135 IGSLEHGAHIIVGTPGRIVDHLERNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSP 194

Query: 181 HRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEAL 240
            R RQTL+FSAT     +  +A +++ +P  + + V + E   I QHFY  D    +   
Sbjct: 195 -RERQTLLFSATFPE-QIQSIAKQIMYDPVMVKVAV-THEKSTIEQHFYHLDDDKARMQA 251

Query: 241 LDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAV 300
           L  +L D +    ++F  T+ +T ++ ++L+      +AL G+L Q  R+  + QF    
Sbjct: 252 LQLLLLDRKPESAVVFCNTKRETQKVADELSDAGFSVIALHGDLEQRDRDETLLQFANKS 311

Query: 301 FKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWE 360
             +LV TDVA+RGLDI A+  V N+ +   TE ++HR+GRTGRAG+KG A +    +D  
Sbjct: 312 ACVLVATDVAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAFTFFDDQDGY 371

Query: 361 SFKRVEAFLQQEIQFEVLAGL 381
               +E +L+++IQ E L  L
Sbjct: 372 KIALLEEYLERDIQSEALPSL 392