Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  514 bits (1323), Expect = e-150
 Identities = 268/453 (59%), Positives = 329/453 (72%), Gaps = 13/453 (2%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           +QF D  LD RLL++L H      T IQ+QA+P+ +AG+DL+ASSKTGSGKTLAF+LP +
Sbjct: 1   MQFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAM 60

Query: 65  HKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
            + + T+A + +DPR LIL+PTRELA QVY +LR ++    Y A  + GGENFNDQ KAL
Sbjct: 61  QRVISTRALTKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKAL 120

Query: 125 ARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRR 184
           A+ P FIVATPGR+ADHL+ ++LFL GLE LVLDEADRMLDLGFA +L+ I+ AA H+RR
Sbjct: 121 AKEPHFIVATPGRIADHLEQKNLFLNGLELLVLDEADRMLDLGFAPQLKAINAAADHKRR 180

Query: 185 QTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRI 244
           QTLMFSATLDH+++N++A  LL  P  +AIG    EH+DITQ  YLCDHLDHKEALL R+
Sbjct: 181 QTLMFSATLDHSEINEIAAALLKNPSHVAIGAAHTEHQDITQRIYLCDHLDHKEALLTRL 240

Query: 245 LADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKIL 304
           L+D  ++QVIIFTATRADT+RL  KL+       ALSG L Q  RN IM QF R   +IL
Sbjct: 241 LSDETHKQVIIFTATRADTERLASKLSAQGFATAALSGELKQAARNQIMDQFARGQQQIL 300

Query: 305 VTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKR 364
           VTTDVASRGLD+  V+ VINFDMPK  EEYVHR+GRTGRAG KGDA+SLVGPKDW++FK+
Sbjct: 301 VTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKK 360

Query: 365 VEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKA----KAPSKS---KKAAP 417
           V+ FL++  +  V+ GLE KF GLK    KPK A T+ V KA    KA +KS   K AA 
Sbjct: 361 VQLFLRKTFEISVIQGLEAKFSGLKD---KPKTAATKAVTKAGTKTKAKTKSKTVKTAAS 417

Query: 418 RDKSFYQNVAVGDSVFIPKKKVAPKPEVDLEDD 450
           RDK F   V VGD+   P +K    P +   DD
Sbjct: 418 RDKRFITGVDVGDA---PMRKKPAAPLLQDHDD 447