Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  260 bits (664), Expect = 7e-74
 Identities = 154/412 (37%), Positives = 231/412 (56%), Gaps = 6/412 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  L L ++L+  LA   ++Q T IQ +AIP  +A +D++A ++TG+GKT AF LP+L
Sbjct: 1   MSFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAILAKQDVMAGAQTGTGKTAAFALPIL 60

Query: 65  HKSL--KTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVK 122
            + L       + KD R L+LVPTRELA QV         G      +  GG +   Q  
Sbjct: 61  QQLLIDNESQDAPKDVRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQA 120

Query: 123 ALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHR 182
               G   ++ATPGRL DHL   +L L+ L  LV DEADRMLD+GF  E++ +       
Sbjct: 121 EFKAGIDVLIATPGRLLDHLRQGALNLKRLSVLVFDEADRMLDMGFMDEIKAVLKQVP-A 179

Query: 183 RRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLD 242
           +RQTL+FSATLD + +   +  LL +PK I +   +     + Q  Y  D  D K   + 
Sbjct: 180 QRQTLLFSATLDDS-IFGFSKNLLRDPKLIEVAKRNTTAAQVEQRVYAIDS-DRKTEFVS 237

Query: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302
            ++    ++QV+IF+ T+   D+LT +LNQ  +   A  G+L+Q  R  ++  F++ + +
Sbjct: 238 HLVRSKNWQQVLIFSRTKQGVDKLTTQLNQLGVATQAFHGDLSQGAREKVLKDFKQGLVQ 297

Query: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362
           +LV TDVA+RGLDI  + +VINF++P   E+Y+HR+GRTGRAG+ G A++L   +D    
Sbjct: 298 VLVATDVAARGLDIADLQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLL 357

Query: 363 KRVEAFLQQEIQFEVLAGLEGKFKGLKPR-QAKPKAAPTQRVNKAKAPSKSK 413
           + VEA L + +  +   G E  F  ++P  +   KAA  QR  K     K +
Sbjct: 358 EEVEALLDKRLPQQWYPGFEPDFNKMEPEPRRNSKAAQKQRAKKRALGGKKR 409