Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  247 bits (630), Expect = 8e-70
 Identities = 146/421 (34%), Positives = 235/421 (55%), Gaps = 9/421 (2%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   + K +    +   + IQ QAIP  + G+D++A+++TG+GKT  F LP+L
Sbjct: 1   MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60

Query: 65  HKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
               K     A   R L+L PTRELA QV   + +    L   + ++ GG   N Q++ L
Sbjct: 61  ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKL 120

Query: 125 ARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRR 184
             G   +VATPGRL D    +++    LE LVLDEADRMLD+GF +++++I  A    +R
Sbjct: 121 RHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKI-LAMLPAKR 179

Query: 185 QTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRI 244
           Q LMFSAT    ++ ++A  L+N+P  I++   +     + Q     D  + K ALL ++
Sbjct: 180 QNLMFSATFSD-EIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDK-NQKSALLIQL 237

Query: 245 LADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKIL 304
           +   +++QV++F+ T+   +RL + L Q  + A A+ GN +Q  R   +  F+    ++L
Sbjct: 238 IKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVL 297

Query: 305 VTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKR 364
           V TD+A+RGLDI  +  V+NFD+P   E+YVHR+GRTGRAG  G A+SLV  ++ +  + 
Sbjct: 298 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSEETKLLRD 357

Query: 365 VEAFL-----QQEIQ-FEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKAKAPSKSKKAAPR 418
           +E  +     +QE++ F  +  L         ++ K KA  +QR +++      +  + R
Sbjct: 358 IERLINRVLERQEVEGFSPVHTLPESTLNAHGKENKIKAVASQRKHRSAGKPAPRAGSGR 417

Query: 419 D 419
           D
Sbjct: 418 D 418