Pairwise Alignments

Query, 306 a.a., peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., L,D-transpeptidase family protein from Pantoea sp. MT58

 Score =  263 bits (673), Expect = 3e-75
 Identities = 132/292 (45%), Positives = 194/292 (66%), Gaps = 7/292 (2%)

Query: 20  AAVFDLPIEGSSIVGNTQYHKV-EKGETLADIAKKYDIGFLALMAANRGVDPFLPQEGFV 78
           A  + LP   S ++G     +V +  + L  IA +Y +G L L+ AN G DP+LP+ G  
Sbjct: 24  ATEYPLPPPDSRLIGENVLTQVPDDKQPLESIASRYQVGLLGLLEANPGTDPWLPKAGTQ 83

Query: 79  ISIPAKIILPKVAYEGIVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSK 138
           +++P ++ILP    EGIV+NLAELRLYY+   E KV ++P+GIG++G  TPVM T IS K
Sbjct: 84  LTVPLQMILPDTPREGIVVNLAELRLYYYPKGEDKVIVYPIGIGQLGAATPVMVTQISQK 143

Query: 139 RKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYLIHGTNKDFGV 198
              PTWTP  +IRK Y  +GI LP VVPAGP+NP+G +AMRLA G+G+YLIHGTN  FG+
Sbjct: 144 IPNPTWTPTPNIRKRYAKEGITLPGVVPAGPDNPMGQFAMRLARGTGQYLIHGTNAKFGI 203

Query: 199 GMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVALEPDRSVFIEVHEPLTRSNGV 258
           GMRVS+GCIR+  +DIE L+    +G +V+IIN+P+K A+EPD   ++EVH+PL+ S+  
Sbjct: 204 GMRVSSGCIRLRSEDIEALFNAAPKGTRVQIINQPVKYAVEPDGKRYVEVHQPLSHSDKD 263

Query: 259 KKN---LVVPEELSWWLQEHKISDAKARAAVLAQNGVPVEIA---PPQWETI 304
                 + +  +L  +++  K   A  +A++  ++G+PV ++   P Q +T+
Sbjct: 264 DPQTMPIAISGDLKKFMKSEKSDSALIKASLTRRSGMPVLVSSGEPVQSDTV 315