Pairwise Alignments

Query, 306 a.a., peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., L,D-transpeptidase from Klebsiella michiganensis M5al

 Score =  218 bits (556), Expect = 1e-61
 Identities = 120/293 (40%), Positives = 180/293 (61%), Gaps = 11/293 (3%)

Query: 12  LAVSWSINAAVFDLPIEGSSIVGNTQYHKVEKGET--LADIAKKYDIGFLALMAANRGVD 69
           +  S S  A  + LP EGS +VG+     + +  T  L   A +Y  G   ++ AN GVD
Sbjct: 13  ILTSQSALAVSYPLPPEGSRLVGSPLTITIPQHNTQPLEAFAAQYGQGLSNMLEANPGVD 72

Query: 70  PFLPQEGFVISIPAKIILPKVAYEGIVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTP 129
            +LP+ G  + +P ++ILP    +GIVIN+AE+RLYY+ P    V + P+GIG+ GR+TP
Sbjct: 73  VYLPKSGSTLVVPQQLILPATVRQGIVINVAEMRLYYYPPEGTTVDVLPIGIGQAGRETP 132

Query: 130 V-MQTSISSKRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRLAYGSGEYL 188
               T++  K++ PTWTP A+ R+EY ++G  LP  VPAGP+NP+G YA+   Y    Y 
Sbjct: 133 RNWVTAVERKQEAPTWTPTANTRREYASRGESLPAFVPAGPDNPMGLYAI---YIGRLYA 189

Query: 189 IHGTNKDFGVGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVALEPDRSVFIEV 248
           IHGTN +FG+G+RVS GCIR+   DI++L+  V  G +V+II++P+K  +EPD S ++EV
Sbjct: 190 IHGTNANFGIGLRVSQGCIRLRNDDIKYLFDTVPVGTRVQIIDQPVKYTVEPDGSRWVEV 249

Query: 249 HEPLTRSNGV-----KKNLVVPEELSWWLQEHKISDAKARAAVLAQNGVPVEI 296
           HEPL+R+        K  L V   L  +++   +   +A  A+  ++G+PV I
Sbjct: 250 HEPLSRNRAEYESDRKVPLPVTPALQAFVKGEGVDVNRAEQALERRSGMPVAI 302