Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., deoxyribodipyrimidine photo-lyase type I from Pseudomonas syringae pv. syringae B728a

 Score =  369 bits (946), Expect = e-106
 Identities = 197/470 (41%), Positives = 274/470 (58%), Gaps = 7/470 (1%)

Query: 1   MRLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQ 60
           M+L+W R DLR+ DNTALTAA+  G P  A+Y+ +P QW  H  A  + D   R L EL+
Sbjct: 1   MQLIWLRSDLRAQDNTALTAAMERG-PTLAVYLLSPAQWRSHDDADCKVDFWLRNLVELE 59

Query: 61  QELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSE 120
           + L  LNVPL  ++   +  A   ++ L        +  N++Y ++E +RDQ  Q+ + +
Sbjct: 60  KALGELNVPLLIREADTWDQAPEVLATLCTQFKVEGLHLNQEYGINETRRDQAVQKAMGK 119

Query: 121 QGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWNVPSA 180
            G+ ++++ D+ +  PGS+ TK G +F+VFT FK+   T     +    R        S 
Sbjct: 120 AGVHFNSYLDQLLFKPGSILTKTGNYFQVFTQFKKVCYTRLHEAMPHPVRTPQAQAAQSI 179

Query: 181 LAELVWHPEQAFDYP-RIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSSL 239
            ++ V    + F  P +     W A     R ++  F  E++  Y   RDFPA+ GTS L
Sbjct: 180 KSDAVPKQVKGFATPSKALRDLWPAGEAEARRRMDAFAAEQISYYKTERDFPAKPGTSQL 239

Query: 240 SPYLAIGVLSARQCVARLYHESSMGELSEG---AQVWLSELIWREFYQHLVAIEPNLSKS 296
           S YLA GV+S RQC+      S+ GE   G      W++EL+WREFY+H +   P +S+ 
Sbjct: 240 SAYLAAGVISPRQCLHAAL-ASNQGEFETGDVGTVTWINELLWREFYKHTLVGYPRVSRH 298

Query: 297 RDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKD 356
           R F      L+W +  E+ + W E +TG PI+DAAMRQL +TGWMHNRLRM+VA FLTK+
Sbjct: 299 RAFRPETEALKWRDAPEELRAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKN 358

Query: 357 LHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDF 416
           L IDWR GER+FM  LIDGD A+NNGGWQW +STG D  PYFRIFNP+SQ E+FDP G F
Sbjct: 359 LLIDWREGERFFMRHLIDGDLASNNGGWQWSSSTGTDSAPYFRIFNPLSQSERFDPEGVF 418

Query: 417 IRRWVPELRSVSSAYIHQPWTY-PAVNSVLYPARLVDHKQEREVTLRLYK 465
           I+RW+PEL  ++   IH P        +  YP  +VD  + R   L  +K
Sbjct: 419 IKRWLPELADMNKKQIHDPSLIGDLFGAADYPKPIVDLSKSRARALAAFK 468