Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., DASH family cryptochrome from Synechocystis sp000284455 PCC 6803

 Score =  198 bits (503), Expect = 4e-55
 Identities = 155/493 (31%), Positives = 232/493 (47%), Gaps = 51/493 (10%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHH-----LAPIQADLIWRRLA 57
           LVWFR DLR  D+  L  AL SG  + A+Y   P Q+ Q H       P +++ + + + 
Sbjct: 9   LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQ 68

Query: 58  ELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQL 117
            L + L  +   L        Q     + Q+AK +NA  +  +R+   +E   ++   + 
Sbjct: 69  NLAESLQKVGNKLLVTTGLPEQV----IPQIAKQINAKTIYYHREVTQEELDVERNLVKQ 124

Query: 118 LSEQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNR------- 170
           L+  GI    +    +  P  +     +   +FT F++          I K +       
Sbjct: 125 LTILGIEAKGYWGSTLCHPEDLPFSIQDLPDLFTKFRKD---------IEKKKISIRPCF 175

Query: 171 --PVALWNVPSALAELVWHPEQAFDYPRIDSTPWAA--DFETVR-AQLRDFC--RERVQD 223
             P  L   P+   EL   P + F     D     A    ET   A+L+D+    +R++D
Sbjct: 176 FAPSQLLPSPNIKLELTAPPPEFFPQINFDHRSVLAFQGGETAGLARLQDYFWHGDRLKD 235

Query: 224 YHQARD-FPAREGTSSLSPYLAIGVLSAR---QCVARLYHESSMGELSEGAQVWLS-ELI 278
           Y + R+     + +S  SP+LA+G LS R   Q V R   E     +S  +  WL  EL+
Sbjct: 236 YKETRNGMVGADYSSKFSPWLALGCLSPRFIYQEVKRYEQE----RVSNDSTHWLIFELL 291

Query: 279 WREFYQHLVAIEPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQT 338
           WR+F++ +     N   +R  +       W  D  +F+LW  G+TGYP+VDA MR+LN T
Sbjct: 292 WRDFFRFVAQKYGNKLFNRGGL-LNKNFPWQEDQVRFELWRSGQTGYPLVDANMRELNLT 350

Query: 339 GWMHNRLRMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYF 398
           G+M NR R  VASFL K+L IDWRWG  +F S LID D  +N G W + A  G D +  F
Sbjct: 351 GFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGNDARD-F 409

Query: 399 RIFNPVSQGEKFDPNGDFIRRWVPELRSVSSAYIHQPWTYPAVN--------SVLYPARL 450
           R FN   Q +++DP G ++R W+PEL+++    IHQPW   A           V YP   
Sbjct: 410 RYFNIPKQSQQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSATEQKQWGVQLGVDYPRPC 469

Query: 451 VDHKQEREVTLRL 463
           V+  Q  E   ++
Sbjct: 470 VNFHQSVEARRKI 482