Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., Deoxyribodipyrimidine photo-lyase type I from Synechococcus elongatus PCC 7942

 Score =  279 bits (714), Expect = 1e-79
 Identities = 184/476 (38%), Positives = 237/476 (49%), Gaps = 19/476 (3%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
           L W RRDLR  DN  L AA      +  ++   P+      +AP +   +   L ELQQ 
Sbjct: 6   LFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMAPARVAYLQGCLQELQQR 65

Query: 63  LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122
                  L   Q  D Q     + QLA+ L A  V  N+D E   + RD      L   G
Sbjct: 66  YQQAGSRLLLLQ-GDPQHL---IPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAG 121

Query: 123 IIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQP-PVIGKNRPVALWN----- 176
           I      D+ +  P  + +  G  + V+ PF + W    +P PV      V L       
Sbjct: 122 IRAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQPKPTPVATPTELVDLSPEQLTA 181

Query: 177 -VPSALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREG 235
             P  L+EL    +  FD+      P         A+L++FC   + DY   R+FPA  G
Sbjct: 182 IAPLLLSELPTLKQLGFDWD--GGFPVEPGETAAIARLQEFCDRAIADYDPQRNFPAEAG 239

Query: 236 TSSLSPYL---AIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPN 292
           TS LSP L   AIG+  A Q  +  +  S   E     +VW  EL WREFYQH +   P+
Sbjct: 240 TSGLSPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPS 299

Query: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
           L+       W  +  W N    F  W + +TGYPIVDAAMRQL +TGWMHNR RMIVASF
Sbjct: 300 LADGPYRSLW-QQFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCRMIVASF 358

Query: 353 LTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDP 412
           LTKDL IDWR GE++FM  L+DGD AANNGGWQW AS+G D +P  RIFNP SQ +KFD 
Sbjct: 359 LTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKP-LRIFNPASQAKKFDA 417

Query: 413 NGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVLYPARLVDHKQEREVTLRLYKTAK 468
              +I+RW+PELR V    +      P +    YPA +V+H   ++    LY   K
Sbjct: 418 TATYIKRWLPELRHVHPKDLISGEITP-IERRGYPAPIVNHNLRQKQFKALYNQLK 472