Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., deoxyribodipyrimidine photo-lyase PhrB from Phaeobacter inhibens DSM 17395

 Score =  214 bits (546), Expect = 4e-60
 Identities = 154/433 (35%), Positives = 211/433 (48%), Gaps = 35/433 (8%)

Query: 5   WFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQELA 64
           W RRDLR  DN AL AA+ +G PV  ++I    +     L       +   LA L +EL 
Sbjct: 14  WVRRDLRLADNPALAAAVAAGVPVIPVFIF---ETLDEDLGAAPRFRLGLGLAHLAKELE 70

Query: 65  ALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQGII 124
                L  ++      A   ++QL     A  V   R Y+     RD   ++ L  QGI 
Sbjct: 71  QRGARLILRR----GPAQEVLTQLITETGAGAVHWTRAYDPQAIARDTGIKEQLKGQGIA 126

Query: 125 WSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWNVPSAL-AE 183
             +F    +  P +V TK G  ++V++P+   W ++    V G      L   PS + A 
Sbjct: 127 AKSFGGHLLFEPWTVETKTGGMYRVYSPY---WKSVRDRDVDG------LIAAPSRIPAP 177

Query: 184 LVWHPEQAFD-YPRIDSTPWAADF---------ETVRAQLRDFCRERVQDYHQARDFPAR 233
             W      D +    +    AD          +  + +L +F   RV DY Q RDFPA 
Sbjct: 178 AHWPTSDDLDSWQMAAAMRRGADVVAQYCRVGEDAAQERLAEFLDTRVADYKQDRDFPAV 237

Query: 234 EGTSSLSPYLAIGVLSARQCVARLYHESSMGELS--EGAQVWLSELIWREFYQHLVAIEP 291
           + TS LS  LA G +S R    R++H       +   GA+ +L E++WREF  HL+   P
Sbjct: 238 DATSGLSENLAWGEISPR----RMWHHGLEARRAGKSGAEHFLKEIVWREFAYHLMFHTP 293

Query: 292 NLSKSRDFVEWGARLEW-WNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVA 350
           ++       EW     W   D++K   W  G+TGY  VDAAMR+L  TG MHNR RMIVA
Sbjct: 294 HILTRNWRPEW-EHFNWSERDDDKVDAWRRGQTGYNFVDAAMRELYVTGKMHNRARMIVA 352

Query: 351 SFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKF 410
           SFLTK +   WR G+++F   L+D D A+N  GWQW A +G D  P+FRIFNP  Q EKF
Sbjct: 353 SFLTKHMLTHWRIGQQWFEECLVDWDPASNAMGWQWVAGSGPDASPFFRIFNPDGQLEKF 412

Query: 411 DPNGDFIRRWVPE 423
           DP G +   W+ E
Sbjct: 413 DPKGRYQSAWIAE 425